Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP98P52948 AC091286.1-201ENST00000431233 461 ntBASIC5.04□□□□□ -1.6
NUP98P52948 HMGN2P31-201ENST00000432430 273 ntBASIC5.04□□□□□ -1.6
NUP98P52948 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NUP98P52948 GAPDHP36-201ENST00000480688 918 ntBASIC5.04□□□□□ -1.6
NUP98P52948 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP98P52948 AC063950.1-201ENST00000552036 308 ntBASIC5.04□□□□□ -1.6
NUP98P52948 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP98P52948 AC009852.2-201ENST00000567898 485 ntBASIC5.04□□□□□ -1.6
NUP98P52948 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP98P52948 AL161756.2-201ENST00000604597 246 ntBASIC5.04□□□□□ -1.6
NUP98P52948 AC023509.5-201ENST00000617434 807 ntBASIC5.04□□□□□ -1.6
NUP98P52948 AL357559.1-201ENST00000622228 274 ntBASIC5.04□□□□□ -1.6
NUP98P52948 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.04□□□□□ -1.6
NUP98P52948 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP98P52948 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NUP98P52948 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP98P52948 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
NUP98P52948 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP98P52948 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
NUP98P52948 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 SNORA73.2-201ENST00000364946 201 ntBASIC5.03□□□□□ -1.6
NUP98P52948 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.03□□□□□ -1.6
NUP98P52948 RAB9AP3-201ENST00000412737 573 ntBASIC5.03□□□□□ -1.6
NUP98P52948 AC004448.2-201ENST00000422360 586 ntBASIC5.03□□□□□ -1.6
NUP98P52948 RBMY1KP-201ENST00000423480 476 ntBASIC5.03□□□□□ -1.6
NUP98P52948 AL157884.3-201ENST00000448273 1184 ntBASIC5.03□□□□□ -1.6
NUP98P52948 RPS17P13-201ENST00000448974 407 ntBASIC5.03□□□□□ -1.6
NUP98P52948 RAB9AP1-201ENST00000449393 573 ntBASIC5.03□□□□□ -1.6
NUP98P52948 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP98P52948 RN7SL323P-201ENST00000494712 295 ntBASIC5.03□□□□□ -1.6
NUP98P52948 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.03□□□□□ -1.6
NUP98P52948 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.03□□□□□ -1.6
NUP98P52948 AC015726.1-201ENST00000602353 681 ntBASIC5.03□□□□□ -1.6
NUP98P52948 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.03□□□□□ -1.6
NUP98P52948 AC091167.4-201ENST00000605079 184 ntBASIC5.03□□□□□ -1.6
NUP98P52948 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NUP98P52948 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP98P52948 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.03□□□□□ -1.6
NUP98P52948 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP98P52948 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP98P52948 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.03□□□□□ -1.6
NUP98P52948 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
NUP98P52948 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NUP98P52948 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.02□□□□□ -1.61
NUP98P52948 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP98P52948 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NUP98P52948 SNORA63.1-201ENST00000362493 131 ntBASIC5.02□□□□□ -1.61
NUP98P52948 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP98P52948 VN1R8P-201ENST00000407739 893 ntBASIC5.02□□□□□ -1.61
NUP98P52948 YME1L1P1-201ENST00000429435 297 ntBASIC5.02□□□□□ -1.61
NUP98P52948 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP98P52948 FABP3P2-201ENST00000453169 399 ntBASIC5.02□□□□□ -1.61
NUP98P52948 OR9M1P-201ENST00000459641 921 ntBASIC5.02□□□□□ -1.61
NUP98P52948 RPL7L1P8-201ENST00000469911 741 ntBASIC5.02□□□□□ -1.61
NUP98P52948 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
NUP98P52948 AC025554.1-201ENST00000505641 188 ntBASIC5.02□□□□□ -1.61
NUP98P52948 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP98P52948 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP98P52948 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.02□□□□□ -1.61
NUP98P52948 MIR3936-201ENST00000584304 110 ntBASIC5.02□□□□□ -1.61
NUP98P52948 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP98P52948 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP98P52948 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP98P52948 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP98P52948 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP98P52948 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP98P52948 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
NUP98P52948 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP98P52948 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP98P52948 U1.1-201ENST00000384101 164 ntBASIC5.02□□□□□ -1.61
NUP98P52948 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NUP98P52948 CYP4F29P-201ENST00000420685 446 ntBASIC5.02□□□□□ -1.61
NUP98P52948 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NUP98P52948 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.02□□□□□ -1.61
NUP98P52948 AC018635.1-201ENST00000468292 1030 ntBASIC5.02□□□□□ -1.61
NUP98P52948 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.02□□□□□ -1.61
NUP98P52948 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP98P52948 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.02□□□□□ -1.61
NUP98P52948 AL606490.9-201ENST00000603331 271 ntBASIC5.02□□□□□ -1.61
NUP98P52948 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.02□□□□□ -1.61
NUP98P52948 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NUP98P52948 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP98P52948 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP98P52948 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NUP98P52948 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP98P52948 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.01□□□□□ -1.61
NUP98P52948 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP98P52948 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
NUP98P52948 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP98P52948 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP98P52948 MIR30B-201ENST00000384850 88 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms