Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.16□□□□□ -1.42
MRE11P49959 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 RAB9BP1-201ENST00000519581 626 ntBASIC6.16□□□□□ -1.42
MRE11P49959 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
MRE11P49959 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.16□□□□□ -1.42
MRE11P49959 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.16□□□□□ -1.42
MRE11P49959 AC023813.2-201ENST00000564321 469 ntBASIC6.16□□□□□ -1.42
MRE11P49959 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC6.16□□□□□ -1.42
MRE11P49959 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.16□□□□□ -1.42
MRE11P49959 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.16□□□□□ -1.42
MRE11P49959 MRPS35P3-201ENST00000603189 709 ntBASIC6.16□□□□□ -1.42
MRE11P49959 AC015922.4-201ENST00000612568 690 ntBASIC6.16□□□□□ -1.42
MRE11P49959 MIR1322-201ENST00000638013 71 ntBASIC6.16□□□□□ -1.42
MRE11P49959 AC103706.2-201ENST00000638080 240 ntBASIC6.16□□□□□ -1.42
MRE11P49959 ELL2P3-201ENST00000457883 1602 ntBASIC6.16□□□□□ -1.42
MRE11P49959 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 MTND4P10-201ENST00000446199 1363 ntBASIC6.16□□□□□ -1.42
MRE11P49959 AC107021.2-201ENST00000567714 2095 ntBASIC6.16□□□□□ -1.42
MRE11P49959 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MRE11P49959 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.16□□□□□ -1.42
MRE11P49959 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MRE11P49959 AC100871.1-201ENST00000507871 1456 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AC012618.3-205ENST00000637896 1496 ntBASIC6.15□□□□□ -1.42
MRE11P49959 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
MRE11P49959 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.15□□□□□ -1.42
MRE11P49959 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.15□□□□□ -1.42
MRE11P49959 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MRE11P49959 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
MRE11P49959 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MRE11P49959 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.15□□□□□ -1.42
MRE11P49959 RNU6-236P-201ENST00000363886 106 ntBASIC6.15□□□□□ -1.42
MRE11P49959 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
MRE11P49959 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MRE11P49959 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
MRE11P49959 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MRE11P49959 RPS6P23-201ENST00000413224 722 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.15□□□□□ -1.42
MRE11P49959 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.15□□□□□ -1.42
MRE11P49959 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AL035407.1-201ENST00000429211 571 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AC124944.2-201ENST00000429866 1242 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.15□□□□□ -1.42
MRE11P49959 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.15□□□□□ -1.42
MRE11P49959 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.15□□□□□ -1.42
MRE11P49959 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.15□□□□□ -1.42
MRE11P49959 PSMD10P3-201ENST00000437000 448 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AL445567.1-201ENST00000439121 144 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.15□□□□□ -1.42
MRE11P49959 PTENP1-201ENST00000447117 1215 ntBASIC6.15□□□□□ -1.42
MRE11P49959 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.15□□□□□ -1.42
MRE11P49959 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.15□□□□□ -1.42
MRE11P49959 MRPL35P4-201ENST00000453682 566 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.15□□□□□ -1.42
MRE11P49959 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.15□□□□□ -1.42
MRE11P49959 RPS17P15-201ENST00000475609 349 ntBASIC6.15□□□□□ -1.42
MRE11P49959 RN7SL547P-201ENST00000490793 290 ntBASIC6.15□□□□□ -1.42
MRE11P49959 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MRE11P49959 AC105031.1-201ENST00000518550 476 ntBASIC6.15□□□□□ -1.42
MRE11P49959 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.15□□□□□ -1.42
MRE11P49959 AC022360.1-201ENST00000521058 340 ntBASIC6.15□□□□□ -1.42
MRE11P49959 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.15□□□□□ -1.42
MRE11P49959 HMGB1P1-201ENST00000522557 636 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.15□□□□□ -1.42
MRE11P49959 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.15□□□□□ -1.42
MRE11P49959 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.15□□□□□ -1.42
MRE11P49959 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.15□□□□□ -1.42
MRE11P49959 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.15□□□□□ -1.42
MRE11P49959 TOMM20P2-201ENST00000540082 421 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AL390334.1-201ENST00000556395 450 ntBASIC6.15□□□□□ -1.42
MRE11P49959 MTND3P19-201ENST00000603825 345 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AL353600.1-201ENST00000608148 251 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.15□□□□□ -1.42
MRE11P49959 AL359513.1-201ENST00000614364 557 ntBASIC6.15□□□□□ -1.42
MRE11P49959 RMST_5.1-201ENST00000618704 126 ntBASIC6.15□□□□□ -1.42
MRE11P49959 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AC067852.7-201ENST00000623270 535 ntBASIC6.15□□□□□ -1.42
MRE11P49959 AC098679.5-201ENST00000624394 571 ntBASIC6.15□□□□□ -1.42
MRE11P49959 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MRE11P49959 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.15□□□□□ -1.42
MRE11P49959 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.15□□□□□ -1.43
MRE11P49959 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.15□□□□□ -1.43
MRE11P49959 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.15□□□□□ -1.43
MRE11P49959 DDX18P5-201ENST00000534547 1306 ntBASIC6.15□□□□□ -1.43
MRE11P49959 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.15□□□□□ -1.43
MRE11P49959 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.15□□□□□ -1.43
MRE11P49959 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.15□□□□□ -1.43
MRE11P49959 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.15□□□□□ -1.43
MRE11P49959 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
MRE11P49959 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MRE11P49959 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
MRE11P49959 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
MRE11P49959 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
MRE11P49959 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
MRE11P49959 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
MRE11P49959 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms