Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 BNIP3P41-202ENST00000616656 861 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.57□□□□□ -1.68
TNFSF9P41273 TMEM30CP-203ENST00000637814 1035 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.57□□□□□ -1.68
TNFSF9P41273 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 THAP12P8-201ENST00000447914 2115 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 AL606537.1-201ENST00000607258 2011 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 NOL8P1-201ENST00000508336 3529 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TNFSF9P41273 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 RNU1-15P-201ENST00000353977 144 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 AC009237.10-201ENST00000414112 510 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 AL590806.1-201ENST00000415818 853 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 MTCYBP21-201ENST00000443300 1113 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFSF9P41273 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFSF9P41273 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 AC113398.2-201ENST00000507630 558 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 RPS27AP18-201ENST00000515536 459 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 AC008694.2-201ENST00000517591 306 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFSF9P41273 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 AC122134.1-201ENST00000565664 1104 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 AC022655.2-201ENST00000577280 318 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFSF9P41273 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF9P41273 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFSF9P41273 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFSF9P41273 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFSF9P41273 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 SAMMSON-213ENST00000641336 1521 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFSF9P41273 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 AP000756.2-201ENST00000624168 2567 ntBASIC4.56□□□□□ -1.68
TNFSF9P41273 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF9P41273 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TNFSF9P41273 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TNFSF9P41273 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF9P41273 HDGFP1-201ENST00000405943 252 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 RN7SKP33-201ENST00000410942 340 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 RN7SKP263-201ENST00000411194 309 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 OR8G2P-201ENST00000412796 908 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 PRELID3BP10-201ENST00000431957 584 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF9P41273 OR4C10P-201ENST00000434991 931 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.55□□□□□ -1.68
TNFSF9P41273 RPL7AP28-201ENST00000464513 571 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
TNFSF9P41273 OR9N1P-201ENST00000491296 333 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 AC021146.3-201ENST00000511911 260 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF9P41273 AC084824.1-201ENST00000550917 1005 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF9P41273 BNIP3P5-201ENST00000562290 498 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF9P41273 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF9P41273 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF9P41273 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF9P41273 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF9P41273 AC067959.1-201ENST00000604334 379 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 AL135786.2-201ENST00000608422 615 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF9P41273 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF9P41273 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF9P41273 AC104260.2-201ENST00000623551 3497 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.55□□□□□ -1.68
TNFSF9P41273 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF9P41273 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
TNFSF9P41273 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF9P41273 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF9P41273 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.55□□□□□ -1.68
TNFSF9P41273 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF9P41273 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF9P41273 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFSF9P41273 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFSF9P41273 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TNFSF9P41273 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms