Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RNU1-20P-201ENST00000363314 162 ntBASIC5.94□□□□□ -1.46
CPS1P31327 RNA5SP175-201ENST00000364275 119 ntBASIC5.94□□□□□ -1.46
CPS1P31327 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.94□□□□□ -1.46
CPS1P31327 RPL21P17-201ENST00000397467 475 ntBASIC5.94□□□□□ -1.46
CPS1P31327 RPS26P4-201ENST00000431743 355 ntBASIC5.94□□□□□ -1.46
CPS1P31327 GTF3AP5-201ENST00000442645 697 ntBASIC5.94□□□□□ -1.46
CPS1P31327 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.94□□□□□ -1.46
CPS1P31327 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.94□□□□□ -1.46
CPS1P31327 SNRPCP3-201ENST00000474888 476 ntBASIC5.94□□□□□ -1.46
CPS1P31327 GTF2IP8-201ENST00000560687 584 ntBASIC5.94□□□□□ -1.46
CPS1P31327 AC005520.3-201ENST00000602874 370 ntBASIC5.94□□□□□ -1.46
CPS1P31327 AL022393.1-201ENST00000625142 1677 ntBASIC5.94□□□□□ -1.46
CPS1P31327 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.94□□□□□ -1.46
CPS1P31327 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.94□□□□□ -1.46
CPS1P31327 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CPS1P31327 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CPS1P31327 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CPS1P31327 AL137918.1-201ENST00000624542 1922 ntBASIC5.94□□□□□ -1.46
CPS1P31327 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.94□□□□□ -1.46
CPS1P31327 AL159987.2-201ENST00000432754 307 ntBASIC5.94□□□□□ -1.46
CPS1P31327 AC236972.1-201ENST00000433225 199 ntBASIC5.94□□□□□ -1.46
CPS1P31327 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.94□□□□□ -1.46
CPS1P31327 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.94□□□□□ -1.46
CPS1P31327 HMGB2P1-201ENST00000591146 634 ntBASIC5.94□□□□□ -1.46
CPS1P31327 AC010503.3-201ENST00000594355 540 ntBASIC5.94□□□□□ -1.46
CPS1P31327 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.94□□□□□ -1.46
CPS1P31327 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.94□□□□□ -1.46
CPS1P31327 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
CPS1P31327 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CPS1P31327 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.93□□□□□ -1.46
CPS1P31327 MAPK10-286ENST00000641208 8747 ntBASIC5.93□□□□□ -1.46
CPS1P31327 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CPS1P31327 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.93□□□□□ -1.46
CPS1P31327 ZNF402P-201ENST00000404435 3100 ntBASIC5.93□□□□□ -1.46
CPS1P31327 RNVU1-14-201ENST00000384770 164 ntBASIC5.93□□□□□ -1.46
CPS1P31327 EIF4A1P1-201ENST00000420241 934 ntBASIC5.93□□□□□ -1.46
CPS1P31327 AC115115.1-201ENST00000449927 248 ntBASIC5.93□□□□□ -1.46
CPS1P31327 RPL23AP81-201ENST00000455252 467 ntBASIC5.93□□□□□ -1.46
CPS1P31327 AC090602.1-201ENST00000469695 252 ntBASIC5.93□□□□□ -1.46
CPS1P31327 AF213884.1-201ENST00000488102 463 ntBASIC5.93□□□□□ -1.46
CPS1P31327 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.93□□□□□ -1.46
CPS1P31327 RPS4XP18-201ENST00000495480 763 ntBASIC5.93□□□□□ -1.46
CPS1P31327 HMGB3P16-201ENST00000508037 287 ntBASIC5.93□□□□□ -1.46
CPS1P31327 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.93□□□□□ -1.46
CPS1P31327 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.93□□□□□ -1.46
CPS1P31327 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.93□□□□□ -1.46
CPS1P31327 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.93□□□□□ -1.46
CPS1P31327 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.93□□□□□ -1.46
CPS1P31327 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.93□□□□□ -1.46
CPS1P31327 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CPS1P31327 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CPS1P31327 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.92□□□□□ -1.46
CPS1P31327 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPS1P31327 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPS1P31327 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
CPS1P31327 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPS1P31327 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.92□□□□□ -1.46
CPS1P31327 CTSL3P-202ENST00000412179 788 ntBASIC5.92□□□□□ -1.46
CPS1P31327 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.92□□□□□ -1.46
CPS1P31327 BX119904.3-201ENST00000428194 957 ntBASIC5.92□□□□□ -1.46
CPS1P31327 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.92□□□□□ -1.46
CPS1P31327 DEFB109A-201ENST00000482450 265 ntBASIC5.92□□□□□ -1.46
CPS1P31327 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.92□□□□□ -1.46
CPS1P31327 RNA5SP303-201ENST00000516192 130 ntBASIC5.92□□□□□ -1.46
CPS1P31327 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.92□□□□□ -1.46
CPS1P31327 AC027455.1-201ENST00000574104 594 ntBASIC5.92□□□□□ -1.46
CPS1P31327 AC005972.3-201ENST00000606304 481 ntBASIC5.92□□□□□ -1.46
CPS1P31327 SCARNA15.3-201ENST00000626315 122 ntBASIC5.92□□□□□ -1.46
CPS1P31327 SCARNA4.1-201ENST00000628597 123 ntBASIC5.92□□□□□ -1.46
CPS1P31327 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPS1P31327 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CPS1P31327 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.92□□□□□ -1.46
CPS1P31327 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPS1P31327 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CPS1P31327 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.92□□□□□ -1.46
CPS1P31327 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPS1P31327 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CPS1P31327 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CPS1P31327 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CPS1P31327 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.91□□□□□ -1.46
CPS1P31327 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CPS1P31327 OR52E6-202ENST00000379946 954 ntBASIC5.91□□□□□ -1.46
CPS1P31327 RPL38P1-201ENST00000460914 211 ntBASIC5.91□□□□□ -1.46
CPS1P31327 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.91□□□□□ -1.46
CPS1P31327 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.91□□□□□ -1.46
CPS1P31327 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.91□□□□□ -1.46
CPS1P31327 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.91□□□□□ -1.46
CPS1P31327 COX6CP4-201ENST00000605798 228 ntBASIC5.91□□□□□ -1.46
CPS1P31327 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
CPS1P31327 AL731532.2-201ENST00000623542 1953 ntBASIC5.91□□□□□ -1.46
CPS1P31327 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CPS1P31327 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
CPS1P31327 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CPS1P31327 AC116667.1-201ENST00000604855 2072 ntBASIC5.91□□□□□ -1.46
CPS1P31327 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CPS1P31327 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CPS1P31327 NPM1P37-201ENST00000403105 874 ntBASIC5.9□□□□□ -1.46
CPS1P31327 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.9□□□□□ -1.46
CPS1P31327 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.9□□□□□ -1.46
CPS1P31327 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms