Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN6P29350 AL512782.1-201ENST00000603093 364 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AL391358.1-201ENST00000605342 190 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN6P29350 AC243654.2-201ENST00000612843 443 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AL118556.2-201ENST00000614375 824 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN6P29350 AC107308.1-201ENST00000615897 301 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AC003001.2-201ENST00000616294 831 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AP006248.2-201ENST00000623309 592 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 AC011815.3-201ENST00000624194 473 ntBASIC4.42□□□□□ -1.7
PTPN6P29350 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN6P29350 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
PTPN6P29350 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PTPN6P29350 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN6P29350 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN6P29350 AC135352.1-201ENST00000506173 1418 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 AL355852.1-201ENST00000454081 1771 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTPN6P29350 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTPN6P29350 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN6P29350 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN6P29350 HSPD1P16-201ENST00000402302 394 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 RN7SKP100-201ENST00000411258 284 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.41□□□□□ -1.7
PTPN6P29350 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN6P29350 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN6P29350 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN6P29350 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN6P29350 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN6P29350 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.41□□□□□ -1.7
PTPN6P29350 OR1H1P-201ENST00000448731 937 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 MTND5P8-201ENST00000449817 1083 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN6P29350 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.41□□□□□ -1.7
PTPN6P29350 AC005008.1-201ENST00000456151 612 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 RPS29P22-201ENST00000472363 168 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 OR52A4P-201ENST00000472867 958 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PTPN6P29350 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN6P29350 NDUFB4P12-201ENST00000513465 390 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 AC092593.2-201ENST00000513866 913 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN6P29350 RNU6-1004P-201ENST00000516584 111 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPN6P29350 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPN6P29350 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN6P29350 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPN6P29350 GSTP1P1-201ENST00000548078 319 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 AC133555.2-201ENST00000550213 292 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 CR383656.6-201ENST00000550518 394 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 AC091042.1-201ENST00000579213 173 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.41□□□□□ -1.7
PTPN6P29350 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PTPN6P29350 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 LINC00901.1-201ENST00000617252 152 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPN6P29350 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPN6P29350 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN6P29350 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPN6P29350 AL442639.1-201ENST00000625030 1899 ntBASIC4.41□□□□□ -1.7
PTPN6P29350 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PTPN6P29350 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.4□□□□□ -1.7
PTPN6P29350 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.4□□□□□ -1.7
PTPN6P29350 AC139713.2-215ENST00000641428 5037 ntBASIC4.4□□□□□ -1.7
PTPN6P29350 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.4□□□□□ -1.7
PTPN6P29350 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PTPN6P29350 AC093311.1-201ENST00000506586 2021 ntBASIC4.4□□□□□ -1.7
PTPN6P29350 SNORD115-48-201ENST00000364764 76 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN6P29350 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PTPN6P29350 RNA5SP372-201ENST00000390836 115 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN6P29350 AC105402.1-201ENST00000413336 545 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 CEACAMP8-201ENST00000413902 580 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 RPL21P91-201ENST00000429231 479 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 OR2B7P-201ENST00000429302 934 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 NRBF2P3-201ENST00000432731 865 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 ZFAND6P1-201ENST00000434138 605 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.4□□□□□ -1.71
PTPN6P29350 HMGB1P26-201ENST00000452520 628 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 AC007686.1-201ENST00000488511 463 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 RNU1-6P-201ENST00000516290 144 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 RNA5SP360-201ENST00000516555 118 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.4□□□□□ -1.71
PTPN6P29350 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN6P29350 AP001880.2-201ENST00000538233 448 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms