Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.13□□□□□ -1.27
RXRBP28702 MIR5095-201ENST00000578844 88 ntBASIC7.13□□□□□ -1.27
RXRBP28702 BNIP3P11-201ENST00000603878 563 ntBASIC7.13□□□□□ -1.27
RXRBP28702 LSM1P2-201ENST00000604911 322 ntBASIC7.13□□□□□ -1.27
RXRBP28702 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.13□□□□□ -1.27
RXRBP28702 OR1S1-201ENST00000624470 978 ntBASIC7.13□□□□□ -1.27
RXRBP28702 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RXRBP28702 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 CUL4AP1-201ENST00000514750 1863 ntBASIC7.13□□□□□ -1.27
RXRBP28702 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
RXRBP28702 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RXRBP28702 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
RXRBP28702 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.13□□□□□ -1.27
RXRBP28702 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.12□□□□□ -1.27
RXRBP28702 ZNF849P-201ENST00000594711 1566 ntBASIC7.12□□□□□ -1.27
RXRBP28702 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RXRBP28702 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AL137058.3-201ENST00000624531 3099 ntBASIC7.12□□□□□ -1.27
RXRBP28702 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RXRBP28702 AL359715.4-201ENST00000606629 1436 ntBASIC7.12□□□□□ -1.27
RXRBP28702 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RXRBP28702 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC7.12□□□□□ -1.27
RXRBP28702 AL929601.4-201ENST00000613011 1341 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AC007382.1-201ENST00000624376 2618 ntBASIC7.12□□□□□ -1.27
RXRBP28702 OR4G2P-201ENST00000328113 903 ntBASIC7.12□□□□□ -1.27
RXRBP28702 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RXRBP28702 RPL10P10-201ENST00000403509 664 ntBASIC7.12□□□□□ -1.27
RXRBP28702 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC7.12□□□□□ -1.27
RXRBP28702 AC006960.1-201ENST00000419980 153 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.12□□□□□ -1.27
RXRBP28702 RAC1P8-201ENST00000427086 527 ntBASIC7.12□□□□□ -1.27
RXRBP28702 CDY14P-201ENST00000431260 1014 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.12□□□□□ -1.27
RXRBP28702 HSD52-202ENST00000436225 772 ntTSL 3 BASIC7.12□□□□□ -1.27
RXRBP28702 RHOT1P3-201ENST00000436571 331 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AC241584.1-201ENST00000438469 1241 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AL359073.1-201ENST00000448036 403 ntBASIC7.12□□□□□ -1.27
RXRBP28702 CDY23P-201ENST00000451661 1014 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC7.12□□□□□ -1.27
RXRBP28702 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.12□□□□□ -1.27
RXRBP28702 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.12□□□□□ -1.27
RXRBP28702 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RXRBP28702 PRDX4P1-201ENST00000507189 574 ntBASIC7.12□□□□□ -1.27
RXRBP28702 SEPT10P1-201ENST00000517342 1162 ntBASIC7.12□□□□□ -1.27
RXRBP28702 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.12□□□□□ -1.27
RXRBP28702 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.12□□□□□ -1.27
RXRBP28702 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC7.12□□□□□ -1.27
RXRBP28702 AC011611.5-201ENST00000552477 578 ntBASIC7.12□□□□□ -1.27
RXRBP28702 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.12□□□□□ -1.27
RXRBP28702 AC093524.1-201ENST00000564266 1094 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AP005262.1-201ENST00000582646 997 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.12□□□□□ -1.27
RXRBP28702 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.12□□□□□ -1.27
RXRBP28702 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.12□□□□□ -1.27
RXRBP28702 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.12□□□□□ -1.27
RXRBP28702 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC7.12□□□□□ -1.27
RXRBP28702 AC096553.1-201ENST00000605169 829 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AC008945.2-201ENST00000606056 604 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AL627230.1-201ENST00000613077 211 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AL121873.1-201ENST00000616013 524 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AL591926.8-201ENST00000616876 211 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.12□□□□□ -1.27
RXRBP28702 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.12□□□□□ -1.27
RXRBP28702 AC011504.1-201ENST00000623331 4103 ntBASIC7.12□□□□□ -1.27
RXRBP28702 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RXRBP28702 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RXRBP28702 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.12□□□□□ -1.27
RXRBP28702 AL132640.2-201ENST00000559968 1698 ntBASIC7.12□□□□□ -1.27
RXRBP28702 AP000641.1-201ENST00000531988 1639 ntBASIC7.12□□□□□ -1.27
RXRBP28702 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RXRBP28702 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.11□□□□□ -1.27
RXRBP28702 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.11□□□□□ -1.27
RXRBP28702 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.11□□□□□ -1.27
RXRBP28702 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 RNU6-932P-201ENST00000391108 106 ntBASIC7.11□□□□□ -1.27
RXRBP28702 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 RNU2-66P-201ENST00000410650 161 ntBASIC7.11□□□□□ -1.27
RXRBP28702 RNU6-920P-201ENST00000410926 92 ntBASIC7.11□□□□□ -1.27
RXRBP28702 AC007899.1-201ENST00000412776 775 ntBASIC7.11□□□□□ -1.27
RXRBP28702 BTF3P8-201ENST00000414577 526 ntBASIC7.11□□□□□ -1.27
RXRBP28702 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC7.11□□□□□ -1.27
RXRBP28702 MTCO3P1-205ENST00000422088 832 ntBASIC7.11□□□□□ -1.27
RXRBP28702 MTND1P14-201ENST00000427400 950 ntBASIC7.11□□□□□ -1.27
RXRBP28702 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.11□□□□□ -1.27
RXRBP28702 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 AC096775.1-201ENST00000437724 448 ntBASIC7.11□□□□□ -1.27
RXRBP28702 RPS27P5-201ENST00000444247 244 ntBASIC7.11□□□□□ -1.27
RXRBP28702 AL118496.2-201ENST00000448300 230 ntBASIC7.11□□□□□ -1.27
RXRBP28702 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms