Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.65□□□□□ -1.5
ATF4P18848 AL845331.3-202ENST00000562856 261 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.65□□□□□ -1.5
ATF4P18848 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.65□□□□□ -1.5
ATF4P18848 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATF4P18848 RN7SL178P-201ENST00000582930 304 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.65□□□□□ -1.5
ATF4P18848 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.65□□□□□ -1.5
ATF4P18848 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC5.65□□□□□ -1.5
ATF4P18848 OR6L2P-201ENST00000608207 925 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AC093388.1-201ENST00000609166 430 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AL133173.2-201ENST00000614270 90 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AC007014.2-201ENST00000615581 479 ntBASIC5.65□□□□□ -1.5
ATF4P18848 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.65□□□□□ -1.5
ATF4P18848 RN7SL680P-201ENST00000620379 299 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AC129778.1-202ENST00000623812 261 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AL683826.1-201ENST00000624104 627 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AL008636.1-201ENST00000625038 1018 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AL591379.1-207ENST00000635982 261 ntBASIC5.65□□□□□ -1.5
ATF4P18848 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.65□□□□□ -1.5
ATF4P18848 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATF4P18848 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATF4P18848 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.65□□□□□ -1.51
ATF4P18848 OR9K1P-202ENST00000641111 3217 ntBASIC5.65□□□□□ -1.51
ATF4P18848 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ATF4P18848 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC5.65□□□□□ -1.51
ATF4P18848 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ATF4P18848 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATF4P18848 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
ATF4P18848 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATF4P18848 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ATF4P18848 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ATF4P18848 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.65□□□□□ -1.51
ATF4P18848 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 AC024560.2-201ENST00000507981 1497 ntBASIC5.64□□□□□ -1.51
ATF4P18848 RACGAP1P-201ENST00000550663 1879 ntBASIC5.64□□□□□ -1.51
ATF4P18848 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.64□□□□□ -1.51
ATF4P18848 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.64□□□□□ -1.51
ATF4P18848 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 AC096992.2-201ENST00000609553 1684 ntBASIC5.64□□□□□ -1.51
ATF4P18848 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 AL078621.1-201ENST00000272567 768 ntBASIC5.64□□□□□ -1.51
ATF4P18848 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 RNA5SP79-201ENST00000365193 109 ntBASIC5.64□□□□□ -1.51
ATF4P18848 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ATF4P18848 RNU2-5P-201ENST00000410533 180 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AC116036.1-201ENST00000412199 367 ntBASIC5.64□□□□□ -1.51
ATF4P18848 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 AL713922.1-201ENST00000416477 747 ntBASIC5.64□□□□□ -1.51
ATF4P18848 RPL12P12-201ENST00000424633 501 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 E2F6P1-201ENST00000428850 745 ntBASIC5.64□□□□□ -1.51
ATF4P18848 OR2B7P-201ENST00000429302 934 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AC073464.1-201ENST00000429823 534 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC5.64□□□□□ -1.51
ATF4P18848 VDAC2P3-201ENST00000430995 828 ntBASIC5.64□□□□□ -1.51
ATF4P18848 RPL12P16-201ENST00000431098 498 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 AC110602.1-201ENST00000437414 318 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 AC114495.1-201ENST00000441274 436 ntBASIC5.64□□□□□ -1.51
ATF4P18848 E2F6P3-201ENST00000441743 743 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 HIST1H2APS6-201ENST00000448609 364 ntBASIC5.64□□□□□ -1.51
ATF4P18848 FABP3P2-201ENST00000453169 399 ntBASIC5.64□□□□□ -1.51
ATF4P18848 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 AL121769.1-201ENST00000469473 401 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC5.64□□□□□ -1.51
ATF4P18848 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 RN7SL549P-201ENST00000478997 282 ntBASIC5.64□□□□□ -1.51
ATF4P18848 RN7SL647P-201ENST00000485429 300 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.64□□□□□ -1.51
ATF4P18848 AC007182.2-201ENST00000489251 402 ntBASIC5.64□□□□□ -1.51
ATF4P18848 SNX18P24-201ENST00000505249 671 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.64□□□□□ -1.51
ATF4P18848 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.64□□□□□ -1.51
ATF4P18848 CYCSP22-201ENST00000517555 339 ntBASIC5.64□□□□□ -1.51
ATF4P18848 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 AP001893.2-201ENST00000526949 202 ntBASIC5.64□□□□□ -1.51
ATF4P18848 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 AC006512.2-201ENST00000543250 486 ntBASIC5.64□□□□□ -1.51
ATF4P18848 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 HIGD1AP9-201ENST00000550710 279 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.64□□□□□ -1.51
ATF4P18848 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 AC009101.1-201ENST00000568135 242 ntBASIC5.64□□□□□ -1.51
ATF4P18848 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms