Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PDGFRAP16234 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFRAP16234 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFRAP16234 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 AL355852.1-201ENST00000454081 1771 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AC139713.2-215ENST00000641428 5037 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 MAPK10-320ENST00000641462 6696 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.88□□□□□ -1.63
PDGFRAP16234 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFRAP16234 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFRAP16234 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFRAP16234 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PDGFRAP16234 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFRAP16234 AL445437.1-201ENST00000623157 3087 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PDGFRAP16234 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFRAP16234 A2MP1-204ENST00000566278 4130 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 OR56B2P-201ENST00000317102 954 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 RNA5SP505-201ENST00000364748 108 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFRAP16234 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDGFRAP16234 HMGB1P10-201ENST00000395823 563 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 RPS16P5-201ENST00000406501 404 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 RN7SKP106-201ENST00000410832 272 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 ATG4AP1-201ENST00000416893 538 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFRAP16234 RPL17P35-201ENST00000432217 549 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFRAP16234 AL590762.3-201ENST00000436372 640 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.87□□□□□ -1.63
PDGFRAP16234 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFRAP16234 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFRAP16234 AC005229.2-201ENST00000456995 399 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AL445433.1-201ENST00000457507 257 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 PPIAP21-201ENST00000464473 501 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 RN7SL354P-201ENST00000469282 294 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFRAP16234 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFRAP16234 RN7SL205P-201ENST00000490174 284 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 RPL23AP72-201ENST00000492447 435 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFRAP16234 AC005912.1-201ENST00000495392 255 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AC098799.3-201ENST00000506095 438 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFRAP16234 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.87□□□□□ -1.63
PDGFRAP16234 IGKV1-32-201ENST00000519290 311 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 OR5M2P-201ENST00000529003 936 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.87□□□□□ -1.63
PDGFRAP16234 AC105129.1-201ENST00000560250 297 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AC015912.2-201ENST00000571053 181 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 RN7SL52P-201ENST00000584271 284 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFRAP16234 AL023583.1-201ENST00000607518 1143 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AP001033.2-201ENST00000609701 1003 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AC116447.1-201ENST00000613153 453 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 MIR6780A-201ENST00000615089 68 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 uc_338.18-201ENST00000615451 175 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 RN7SL722P-201ENST00000617780 284 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 RN7SL565P-201ENST00000618246 284 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AL592182.3-201ENST00000642132 3304 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFRAP16234 Z95327.2-201ENST00000414579 1873 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 AC126323.6-202ENST00000568092 3511 ntBASIC4.87□□□□□ -1.63
PDGFRAP16234 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFRAP16234 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.87□□□□□ -1.63
PDGFRAP16234 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDGFRAP16234 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
PDGFRAP16234 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PDGFRAP16234 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFRAP16234 DDX18P4-201ENST00000511690 1966 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 NEAT1-202ENST00000501122 22743 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFRAP16234 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFRAP16234 RNU6-398P-201ENST00000384143 109 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 MIR192-201ENST00000384915 110 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDGFRAP16234 Z98745.1-201ENST00000402553 494 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 XKRYP4-201ENST00000414395 483 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFRAP16234 AL035458.1-201ENST00000433096 585 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFRAP16234 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFRAP16234 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFRAP16234 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFRAP16234 XKRYP5-201ENST00000449659 483 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFRAP16234 RPS27AP16-201ENST00000492222 470 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 RPL23AP73-201ENST00000492507 471 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 RPL36AP41-201ENST00000493820 306 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFRAP16234 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFRAP16234 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDGFRAP16234 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFRAP16234 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFRAP16234 AC018552.3-201ENST00000567416 561 ntBASIC4.86□□□□□ -1.63
PDGFRAP16234 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFRAP16234 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 1415 ms