Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC090607.5-201ENST00000615692 224 ntBASIC6.22□□□□□ -1.41
ITGA4P13612 AL356266.1-201ENST00000623311 483 ntBASIC6.22□□□□□ -1.41
ITGA4P13612 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.22□□□□□ -1.41
ITGA4P13612 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.22□□□□□ -1.41
ITGA4P13612 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.22□□□□□ -1.41
ITGA4P13612 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ITGA4P13612 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ITGA4P13612 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ITGA4P13612 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
ITGA4P13612 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
ITGA4P13612 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.21□□□□□ -1.41
ITGA4P13612 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.21□□□□□ -1.41
ITGA4P13612 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ITGA4P13612 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 SNORA62.2-201ENST00000364672 152 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 RNU6-1283P-201ENST00000365314 105 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 RNA5SP131-201ENST00000365452 119 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 MIR320B1-201ENST00000390209 79 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ITGA4P13612 ZNF603P-201ENST00000405613 487 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 AL133264.1-201ENST00000407157 562 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 RNU2-66P-201ENST00000410650 161 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.21□□□□□ -1.42
ITGA4P13612 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.21□□□□□ -1.42
ITGA4P13612 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.21□□□□□ -1.42
ITGA4P13612 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.21□□□□□ -1.42
ITGA4P13612 NEK4P1-201ENST00000433383 879 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 TMX2P1-201ENST00000436507 708 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.21□□□□□ -1.42
ITGA4P13612 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.21□□□□□ -1.42
ITGA4P13612 RPL23AP35-201ENST00000451906 501 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.21□□□□□ -1.42
ITGA4P13612 MTCO3P11-201ENST00000455103 774 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 SIAH1P1-201ENST00000479411 923 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.21□□□□□ -1.42
ITGA4P13612 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.21□□□□□ -1.42
ITGA4P13612 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.21□□□□□ -1.42
ITGA4P13612 AC105384.2-201ENST00000508433 640 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.21□□□□□ -1.42
ITGA4P13612 RN7SKP31-201ENST00000516354 278 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 IGKV2-18-201ENST00000522607 343 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 AP003392.2-201ENST00000527269 208 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 OR7K1P-201ENST00000546439 926 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 BPTFP1-201ENST00000579209 492 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.21□□□□□ -1.42
ITGA4P13612 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.21□□□□□ -1.42
ITGA4P13612 AL357078.3-201ENST00000607528 618 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 AC012360.2-201ENST00000609349 391 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 AC109347.2-201ENST00000610220 349 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ITGA4P13612 LINC01739-205ENST00000641890 573 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
ITGA4P13612 AC140479.2-201ENST00000421567 3130 ntBASIC6.21□□□□□ -1.42
ITGA4P13612 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
ITGA4P13612 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
ITGA4P13612 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.21□□□□□ -1.42
ITGA4P13612 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
ITGA4P13612 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ITGA4P13612 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ITGA4P13612 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ITGA4P13612 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ITGA4P13612 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ITGA4P13612 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ITGA4P13612 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ITGA4P13612 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ITGA4P13612 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
ITGA4P13612 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ITGA4P13612 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.2□□□□□ -1.42
ITGA4P13612 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ITGA4P13612 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.2□□□□□ -1.42
ITGA4P13612 MIR217-201ENST00000384817 110 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ITGA4P13612 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.2□□□□□ -1.42
ITGA4P13612 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ITGA4P13612 RPL23AP39-201ENST00000415533 405 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 AC017078.1-201ENST00000416146 368 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.2□□□□□ -1.42
ITGA4P13612 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.2□□□□□ -1.42
ITGA4P13612 MGAT2P2-201ENST00000427194 797 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 AC104651.1-201ENST00000427559 735 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 RPL31P54-201ENST00000429803 370 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.2□□□□□ -1.42
ITGA4P13612 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.2□□□□□ -1.42
ITGA4P13612 AC012075.1-201ENST00000436549 580 ntBASIC6.2□□□□□ -1.42
ITGA4P13612 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.2□□□□□ -1.42
ITGA4P13612 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.2□□□□□ -1.42
ITGA4P13612 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.2□□□□□ -1.42
ITGA4P13612 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms