Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC034236.3-201ENST00000605999 461 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.75□□□□□ -1.65
TPM1P09493 AL133243.1-201ENST00000614487 366 ntBASIC4.75□□□□□ -1.65
TPM1P09493 MIR7702-201ENST00000621931 59 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AC008785.1-201ENST00000624475 456 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.75□□□□□ -1.65
TPM1P09493 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TPM1P09493 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TPM1P09493 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.75□□□□□ -1.65
TPM1P09493 CASC19-284ENST00000642142 1868 ntBASIC4.75□□□□□ -1.65
TPM1P09493 AC027287.1-201ENST00000553115 1453 ntBASIC4.75□□□□□ -1.65
TPM1P09493 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TPM1P09493 AC233968.1-201ENST00000611212 1300 ntBASIC4.74□□□□□ -1.65
TPM1P09493 AL627171.1-201ENST00000618845 1308 ntBASIC4.74□□□□□ -1.65
TPM1P09493 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TPM1P09493 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TPM1P09493 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
TPM1P09493 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TPM1P09493 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TPM1P09493 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TPM1P09493 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TPM1P09493 MIR3074-201ENST00000384885 81 ntBASIC4.74□□□□□ -1.65
TPM1P09493 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.74□□□□□ -1.65
TPM1P09493 GLULP6-201ENST00000399502 913 ntBASIC4.74□□□□□ -1.65
TPM1P09493 RPL23AP27-201ENST00000415161 451 ntBASIC4.74□□□□□ -1.65
TPM1P09493 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.74□□□□□ -1.65
TPM1P09493 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.74□□□□□ -1.65
TPM1P09493 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.74□□□□□ -1.65
TPM1P09493 AP001324.1-201ENST00000428553 399 ntBASIC4.74□□□□□ -1.65
TPM1P09493 AC092013.1-201ENST00000438795 332 ntBASIC4.74□□□□□ -1.65
TPM1P09493 AL162591.2-201ENST00000449634 317 ntBASIC4.74□□□□□ -1.65
TPM1P09493 AC091685.2-201ENST00000454924 864 ntBASIC4.74□□□□□ -1.65
TPM1P09493 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.74□□□□□ -1.65
TPM1P09493 METTL15P1-201ENST00000481421 1045 ntBASIC4.74□□□□□ -1.65
TPM1P09493 AC108145.1-201ENST00000503770 153 ntBASIC4.74□□□□□ -1.65
TPM1P09493 ATP1B1P1-201ENST00000509767 915 ntBASIC4.74□□□□□ -1.65
TPM1P09493 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.74□□□□□ -1.65
TPM1P09493 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.74□□□□□ -1.65
TPM1P09493 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.74□□□□□ -1.65
TPM1P09493 AC091042.1-201ENST00000579213 173 ntBASIC4.74□□□□□ -1.65
TPM1P09493 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.74□□□□□ -1.65
TPM1P09493 AC067852.7-201ENST00000623270 535 ntBASIC4.74□□□□□ -1.65
TPM1P09493 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.74□□□□□ -1.65
TPM1P09493 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.74□□□□□ -1.65
TPM1P09493 FP325313.1-201ENST00000638228 703 ntBASIC4.74□□□□□ -1.65
TPM1P09493 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.74□□□□□ -1.65
TPM1P09493 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TPM1P09493 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.74□□□□□ -1.65
TPM1P09493 MAPK10-373ENST00000641983 6772 ntBASIC4.74□□□□□ -1.65
TPM1P09493 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.74□□□□□ -1.65
TPM1P09493 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TPM1P09493 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.73□□□□□ -1.65
TPM1P09493 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TPM1P09493 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TPM1P09493 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
TPM1P09493 SNORA51.8-201ENST00000384234 132 ntBASIC4.73□□□□□ -1.65
TPM1P09493 MIR3065-201ENST00000390137 79 ntBASIC4.73□□□□□ -1.65
TPM1P09493 SNORD66.1-201ENST00000391230 76 ntBASIC4.73□□□□□ -1.65
TPM1P09493 RNU4-34P-201ENST00000410431 124 ntBASIC4.73□□□□□ -1.65
TPM1P09493 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.73□□□□□ -1.65
TPM1P09493 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.73□□□□□ -1.65
TPM1P09493 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 CEACAMP1-201ENST00000434624 1035 ntBASIC4.73□□□□□ -1.65
TPM1P09493 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.73□□□□□ -1.65
TPM1P09493 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.73□□□□□ -1.65
TPM1P09493 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.73□□□□□ -1.65
TPM1P09493 AC239809.1-201ENST00000450470 217 ntBASIC4.73□□□□□ -1.65
TPM1P09493 PPIAP21-201ENST00000464473 501 ntBASIC4.73□□□□□ -1.65
TPM1P09493 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.73□□□□□ -1.65
TPM1P09493 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.73□□□□□ -1.65
TPM1P09493 AP001960.1-201ENST00000506494 658 ntBASIC4.73□□□□□ -1.65
TPM1P09493 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.73□□□□□ -1.65
TPM1P09493 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.73□□□□□ -1.65
TPM1P09493 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.73□□□□□ -1.65
TPM1P09493 DEFB109D-201ENST00000529497 240 ntBASIC4.73□□□□□ -1.65
TPM1P09493 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.73□□□□□ -1.65
TPM1P09493 AC084757.1-201ENST00000559987 490 ntBASIC4.73□□□□□ -1.65
TPM1P09493 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.73□□□□□ -1.65
TPM1P09493 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.73□□□□□ -1.65
TPM1P09493 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.73□□□□□ -1.65
TPM1P09493 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.73□□□□□ -1.65
TPM1P09493 AC005084.1-201ENST00000605160 304 ntBASIC4.73□□□□□ -1.65
TPM1P09493 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 AC087385.3-201ENST00000620477 187 ntBASIC4.73□□□□□ -1.65
TPM1P09493 AC138907.10-201ENST00000623708 983 ntBASIC4.73□□□□□ -1.65
TPM1P09493 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.73□□□□□ -1.65
TPM1P09493 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
TPM1P09493 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 AL592437.2-201ENST00000421655 2434 ntBASIC4.73□□□□□ -1.65
TPM1P09493 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TPM1P09493 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.73□□□□□ -1.65
TPM1P09493 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TPM1P09493 Z82217.1-201ENST00000625157 8149 ntBASIC4.72□□□□□ -1.65
TPM1P09493 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms