Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 SNORA70C-201ENST00000384538 135 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AC104297.1-201ENST00000393779 870 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXC4P09017 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.29□□□□□ -1.72
HOXC4P09017 AL157831.1-201ENST00000426134 473 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 TPTE2P1-204ENST00000435256 593 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 RPL23AP52-201ENST00000439311 478 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXC4P09017 MTCO3P17-201ENST00000443775 513 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXC4P09017 RPL23AP81-201ENST00000455252 467 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 MTCYBP14-201ENST00000457471 715 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AC105137.1-201ENST00000484355 562 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AC113398.2-201ENST00000507630 558 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AC022784.5-201ENST00000522241 437 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 CYCSP29-201ENST00000533731 318 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HOXC4P09017 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HOXC4P09017 AC025884.1-201ENST00000556034 378 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AC027455.1-201ENST00000574104 594 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 MTND2P13-201ENST00000577438 1039 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AC115989.2-201ENST00000578640 563 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AC011477.5-201ENST00000586571 259 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXC4P09017 AC009237.17-201ENST00000618111 748 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 AC140113.4-201ENST00000622087 222 ntBASIC4.29□□□□□ -1.72
HOXC4P09017 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXC4P09017 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HOXC4P09017 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXC4P09017 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC4P09017 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXC4P09017 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXC4P09017 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC4P09017 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC4P09017 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 AC018529.3-201ENST00000624212 2254 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HOXC4P09017 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC4P09017 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HOXC4P09017 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
HOXC4P09017 IL6STP1-201ENST00000346911 1020 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
HOXC4P09017 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 AL356967.1-201ENST00000406305 431 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 RPS20P14-201ENST00000412545 360 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 AC009237.10-201ENST00000414112 510 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 UBTFL3-201ENST00000418934 1024 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC4P09017 OR6C71P-201ENST00000432580 913 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 GSTA7P-201ENST00000438425 448 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC4P09017 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 ATP5G1P3-201ENST00000463301 410 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC4P09017 UBTFL6-201ENST00000477929 1024 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC4P09017 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXC4P09017 RNU6-751P-201ENST00000516382 101 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 RNA5SP49-201ENST00000516450 115 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC4P09017 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC4P09017 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC4P09017 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC4P09017 AC069366.1-201ENST00000583159 838 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC4P09017 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXC4P09017 AC020910.2-201ENST00000603635 610 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 AL135786.2-201ENST00000608422 615 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 MIR8059-201ENST00000620427 81 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 MIR492-201ENST00000638676 116 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HOXC4P09017 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 AC105074.1-201ENST00000623380 3095 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 KPNA2P2-201ENST00000419546 1489 ntBASIC4.28□□□□□ -1.72
HOXC4P09017 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXC4P09017 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXC4P09017 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXC4P09017 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC4P09017 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC4P09017 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HOXC4P09017 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC4P09017 AL133243.3-201ENST00000617415 3004 ntBASIC4.27□□□□□ -1.73
HOXC4P09017 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms