Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SNORD113.2-201ENST00000364166 89 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CAPN1P07384 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CAPN1P07384 RAB28P1-201ENST00000411517 641 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 AL158073.1-201ENST00000426848 1104 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 RPL23AP1-201ENST00000428990 471 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 RPL12P46-201ENST00000436610 195 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 MTCYBP12-201ENST00000440559 1134 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 snoU13.1-201ENST00000459157 104 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 STMN1P2-201ENST00000508435 439 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CAPN1P07384 AC105129.1-201ENST00000560250 297 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 AC022387.2-201ENST00000604050 448 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.5□□□□□ -1.69
CAPN1P07384 AC119674.1-212ENST00000641155 993 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.5□□□□□ -1.69
CAPN1P07384 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
CAPN1P07384 AP001002.1-201ENST00000625148 1513 ntBASIC4.5□□□□□ -1.69
CAPN1P07384 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CAPN1P07384 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CAPN1P07384 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CAPN1P07384 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CAPN1P07384 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 AC090971.4-201ENST00000560291 1800 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CAPN1P07384 EOGT-210ENST00000615922 1931 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
CAPN1P07384 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.49□□□□□ -1.69
CAPN1P07384 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CAPN1P07384 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CAPN1P07384 RNU6-984P-201ENST00000363236 109 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CAPN1P07384 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CAPN1P07384 RN7SKP222-201ENST00000410651 315 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 RNU6-603P-201ENST00000411403 107 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 AC048351.1-201ENST00000420064 602 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.49□□□□□ -1.69
CAPN1P07384 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 ELOCP10-201ENST00000440624 327 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.49□□□□□ -1.69
CAPN1P07384 H2AFZP5-201ENST00000446960 382 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.49□□□□□ -1.69
CAPN1P07384 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.49□□□□□ -1.69
CAPN1P07384 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.49□□□□□ -1.69
CAPN1P07384 MTND6P6-201ENST00000478031 263 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 METTL15P1-201ENST00000481421 1045 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 DEFB109F-201ENST00000491870 277 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 OR52A4P-203ENST00000498233 1014 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 AK3P4-201ENST00000504283 583 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 AC098799.3-201ENST00000506095 438 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.49□□□□□ -1.69
CAPN1P07384 AC034205.1-201ENST00000520621 638 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 CYCSP28-201ENST00000534284 321 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.49□□□□□ -1.69
CAPN1P07384 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.49□□□□□ -1.69
CAPN1P07384 RPL21P7-201ENST00000557463 483 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 AC092868.3-201ENST00000560515 784 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.49□□□□□ -1.69
CAPN1P07384 PSMA6P4-201ENST00000603247 718 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 ELOCP34-201ENST00000604436 327 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 AC084036.1-201ENST00000609190 508 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.49□□□□□ -1.69
CAPN1P07384 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.49□□□□□ -1.69
CAPN1P07384 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CAPN1P07384 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.49□□□□□ -1.69
CAPN1P07384 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CAPN1P07384 AL451142.2-201ENST00000429076 2090 ntBASIC4.49□□□□□ -1.69
CAPN1P07384 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CAPN1P07384 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CAPN1P07384 KARSP3-201ENST00000571212 1504 ntBASIC4.48□□□□□ -1.69
CAPN1P07384 MAPK10-263ENST00000641052 4307 ntBASIC4.48□□□□□ -1.69
CAPN1P07384 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CAPN1P07384 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CAPN1P07384 FABP12P1-201ENST00000401911 322 ntBASIC4.48□□□□□ -1.69
CAPN1P07384 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.48□□□□□ -1.69
CAPN1P07384 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.48□□□□□ -1.69
CAPN1P07384 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.48□□□□□ -1.69
CAPN1P07384 VDAC1P9-201ENST00000412766 841 ntBASIC4.48□□□□□ -1.69
CAPN1P07384 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms