Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.12□□□□□ -1.75
P04436 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
P04436 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
P04436 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
P04436 RNU6-666P-201ENST00000363499 107 ntBASIC4.12□□□□□ -1.75
P04436 MIR421-201ENST00000365696 85 ntBASIC4.12□□□□□ -1.75
P04436 RNU6-31P-201ENST00000384388 108 ntBASIC4.12□□□□□ -1.75
P04436 MIR659-201ENST00000384963 97 ntBASIC4.12□□□□□ -1.75
P04436 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
P04436 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
P04436 U3.22-201ENST00000391120 215 ntBASIC4.12□□□□□ -1.75
P04436 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.12□□□□□ -1.75
P04436 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.12□□□□□ -1.75
P04436 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.12□□□□□ -1.75
P04436 RPL36AP10-201ENST00000421785 322 ntBASIC4.12□□□□□ -1.75
P04436 NIPA2P1-201ENST00000426223 976 ntBASIC4.12□□□□□ -1.75
P04436 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
P04436 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.12□□□□□ -1.75
P04436 AC073143.1-201ENST00000436316 395 ntBASIC4.12□□□□□ -1.75
P04436 RPL12P46-201ENST00000436610 195 ntBASIC4.12□□□□□ -1.75
P04436 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.12□□□□□ -1.75
P04436 TDGF1P1-201ENST00000445734 527 ntBASIC4.12□□□□□ -1.75
P04436 AL031584.1-201ENST00000447169 754 ntBASIC4.12□□□□□ -1.75
P04436 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.12□□□□□ -1.75
P04436 RPL23AP24-201ENST00000458203 385 ntBASIC4.12□□□□□ -1.75
P04436 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
P04436 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.12□□□□□ -1.75
P04436 RN7SKP46-201ENST00000515942 234 ntBASIC4.12□□□□□ -1.75
P04436 IGKV2D-10-201ENST00000520194 281 ntBASIC4.12□□□□□ -1.75
P04436 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.12□□□□□ -1.75
P04436 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.12□□□□□ -1.75
P04436 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.12□□□□□ -1.75
P04436 AC015912.2-201ENST00000571053 181 ntBASIC4.12□□□□□ -1.75
P04436 DPRXP4-201ENST00000578053 568 ntBASIC4.12□□□□□ -1.75
P04436 AP005262.1-201ENST00000582646 997 ntBASIC4.12□□□□□ -1.75
P04436 RN7SL435P-201ENST00000584418 282 ntBASIC4.12□□□□□ -1.75
P04436 MIMT1-201ENST00000597105 1050 ntBASIC4.12□□□□□ -1.75
P04436 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.12□□□□□ -1.75
P04436 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.12□□□□□ -1.75
P04436 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.12□□□□□ -1.75
P04436 AC234782.5-201ENST00000617723 324 ntBASIC4.12□□□□□ -1.75
P04436 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
P04436 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.12□□□□□ -1.75
P04436 NEAT1-202ENST00000501122 22743 ntBASIC4.12□□□□□ -1.75
P04436 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
P04436 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
P04436 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
P04436 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
P04436 CPHL1P-201ENST00000461341 3407 ntBASIC4.12□□□□□ -1.75
P04436 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
P04436 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
P04436 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
P04436 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
P04436 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
P04436 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.11□□□□□ -1.75
P04436 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
P04436 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
P04436 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
P04436 LINC00622-201ENST00000562811 1570 ntBASIC4.11□□□□□ -1.75
P04436 AC021242.1-201ENST00000507315 2035 ntBASIC4.11□□□□□ -1.75
P04436 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.11□□□□□ -1.75
P04436 AL022393.1-201ENST00000625142 1677 ntBASIC4.11□□□□□ -1.75
P04436 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
P04436 AC011155.1-201ENST00000316512 456 ntBASIC4.11□□□□□ -1.75
P04436 RNU4-39P-201ENST00000362455 127 ntBASIC4.11□□□□□ -1.75
P04436 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
P04436 RAB28P1-201ENST00000411517 641 ntBASIC4.11□□□□□ -1.75
P04436 RAD23BP1-201ENST00000421404 1227 ntBASIC4.11□□□□□ -1.75
P04436 RPS26P4-201ENST00000431743 355 ntBASIC4.11□□□□□ -1.75
P04436 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.11□□□□□ -1.75
P04436 RPS20P1-201ENST00000434853 354 ntBASIC4.11□□□□□ -1.75
P04436 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.11□□□□□ -1.75
P04436 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.11□□□□□ -1.75
P04436 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.11□□□□□ -1.75
P04436 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.11□□□□□ -1.75
P04436 EIF2S2P2-201ENST00000447161 982 ntBASIC4.11□□□□□ -1.75
P04436 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.11□□□□□ -1.75
P04436 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.11□□□□□ -1.75
P04436 AC005229.2-201ENST00000456995 399 ntBASIC4.11□□□□□ -1.75
P04436 RPS27AP17-201ENST00000463344 455 ntBASIC4.11□□□□□ -1.75
P04436 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.11□□□□□ -1.75
P04436 RN7SL810P-201ENST00000493031 276 ntBASIC4.11□□□□□ -1.75
P04436 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.11□□□□□ -1.75
P04436 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.11□□□□□ -1.75
P04436 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.11□□□□□ -1.75
P04436 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.11□□□□□ -1.75
P04436 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
P04436 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.11□□□□□ -1.75
P04436 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.11□□□□□ -1.75
P04436 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.11□□□□□ -1.75
P04436 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.11□□□□□ -1.75
P04436 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.11□□□□□ -1.75
P04436 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.11□□□□□ -1.75
P04436 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.11□□□□□ -1.75
P04436 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.11□□□□□ -1.75
P04436 BPIFA4P-203ENST00000603168 689 ntBASIC4.11□□□□□ -1.75
P04436 AC020634.1-201ENST00000608701 549 ntBASIC4.11□□□□□ -1.75
P04436 AC006338.2-201ENST00000616864 791 ntBASIC4.11□□□□□ -1.75
P04436 AC009704.2-201ENST00000618739 483 ntBASIC4.11□□□□□ -1.75
P04436 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms