Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.34□□□□□ -1.39
PDGFAP04085 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
PDGFAP04085 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.34□□□□□ -1.39
PDGFAP04085 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PDGFAP04085 RNU4-79P-201ENST00000362764 141 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 Y_RNA.162-201ENST00000363683 102 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 RNA5SP514-201ENST00000363717 111 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 RNU6-744P-201ENST00000365557 107 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 RNU6-1227P-201ENST00000383981 107 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 RNU6-1316P-201ENST00000384242 108 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 EIF5P1-201ENST00000400019 1231 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFAP04085 SNRPFP1-201ENST00000414761 252 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC013429.2-201ENST00000418798 781 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PDGFAP04085 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFAP04085 USP9YP15-201ENST00000442391 422 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 SDHCP3-201ENST00000445371 506 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFAP04085 AC140076.1-201ENST00000449897 361 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 RN7SL834P-201ENST00000461450 286 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 RPL21P6-201ENST00000479171 504 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC055733.3-201ENST00000505214 523 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFAP04085 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFAP04085 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 AP003080.1-202ENST00000526526 915 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 ZNF705CP-201ENST00000530515 889 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AL109766.1-201ENST00000555080 552 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 AC055876.1-202ENST00000567053 138 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.34□□□□□ -1.39
PDGFAP04085 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.34□□□□□ -1.39
PDGFAP04085 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.34□□□□□ -1.39
PDGFAP04085 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC006328.2-201ENST00000623198 397 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC073592.6-201ENST00000624271 415 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC012005.2-201ENST00000624333 397 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 AC138649.5-201ENST00000637456 137 ntBASIC6.34□□□□□ -1.39
PDGFAP04085 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PDGFAP04085 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
PDGFAP04085 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PDGFAP04085 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PDGFAP04085 AL662795.2-201ENST00000624252 3706 ntBASIC6.34□□□□□ -1.4
PDGFAP04085 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PDGFAP04085 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.34□□□□□ -1.4
PDGFAP04085 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PDGFAP04085 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 AC107081.3-201ENST00000612715 2034 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFAP04085 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFAP04085 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFAP04085 AL512329.1-201ENST00000404600 1592 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 PWAR1-201ENST00000624188 2414 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 STAG3L4-201ENST00000352103 530 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 Y_RNA.166-201ENST00000363730 102 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 SNORD81.2-201ENST00000365153 76 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 RNA5SP279-201ENST00000365513 117 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFAP04085 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFAP04085 RPS4XP8-201ENST00000402039 771 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 Z97832.1-201ENST00000402490 328 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 BTBD10P2-201ENST00000404779 676 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 RNA5SP115-201ENST00000411160 107 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 GSTM3P2-201ENST00000412746 530 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFAP04085 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 RIMKLBP2-201ENST00000424737 654 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFAP04085 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 TAAR7P-201ENST00000436141 242 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms