Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL4A1P02462 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A1P02462 VDAC1P9-201ENST00000412766 841 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A1P02462 RPS23P10-201ENST00000416185 486 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 RPS17P13-201ENST00000448974 407 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 PPIAP15-201ENST00000479662 484 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A1P02462 IGKV2D-19-201ENST00000523346 262 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A1P02462 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A1P02462 MIR3922-201ENST00000585192 84 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 SNORA51-201ENST00000606420 132 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 AC012314.7-201ENST00000619693 93 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 AC015967.1-201ENST00000619893 476 ntBASIC4.89□□□□□ -1.63
COL4A1P02462 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A1P02462 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A1P02462 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A1P02462 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A1P02462 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A1P02462 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COL4A1P02462 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL4A1P02462 AC008155.2-201ENST00000464337 397 ntBASIC4.88□□□□□ -1.63
COL4A1P02462 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.88□□□□□ -1.63
COL4A1P02462 SOD1P3-201ENST00000518682 454 ntBASIC4.88□□□□□ -1.63
COL4A1P02462 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A1P02462 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.88□□□□□ -1.63
COL4A1P02462 AC008759.1-201ENST00000589783 983 ntBASIC4.88□□□□□ -1.63
COL4A1P02462 AC002069.2-201ENST00000603580 883 ntBASIC4.88□□□□□ -1.63
COL4A1P02462 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 AC026979.4-201ENST00000606555 645 ntBASIC4.88□□□□□ -1.63
COL4A1P02462 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COL4A1P02462 AC004656.1-201ENST00000568479 4951 ntBASIC4.88□□□□□ -1.63
COL4A1P02462 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL4A1P02462 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A1P02462 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A1P02462 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A1P02462 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.87□□□□□ -1.63
COL4A1P02462 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A1P02462 AL590704.1-201ENST00000402856 794 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.87□□□□□ -1.63
COL4A1P02462 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.87□□□□□ -1.63
COL4A1P02462 Z97055.1-201ENST00000419730 712 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 HMGN2P31-201ENST00000432430 273 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.87□□□□□ -1.63
COL4A1P02462 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.87□□□□□ -1.63
COL4A1P02462 AL139099.1-201ENST00000497398 403 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.87□□□□□ -1.63
COL4A1P02462 CDH12P2-201ENST00000504393 298 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.87□□□□□ -1.63
COL4A1P02462 RN7SKP157-201ENST00000516174 282 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 OR5D2P-201ENST00000524390 911 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 AC091516.1-201ENST00000549191 703 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.87□□□□□ -1.63
COL4A1P02462 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.87□□□□□ -1.63
COL4A1P02462 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.87□□□□□ -1.63
COL4A1P02462 SNX6P1-201ENST00000601728 1224 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 AL049634.3-201ENST00000604968 457 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.87□□□□□ -1.63
COL4A1P02462 AC015922.4-201ENST00000612568 690 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 AL645927.2-201ENST00000618350 349 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 AC067931.1-201ENST00000624190 671 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.87□□□□□ -1.63
COL4A1P02462 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A1P02462 AC024560.2-201ENST00000507981 1497 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
COL4A1P02462 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.87□□□□□ -1.63
COL4A1P02462 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A1P02462 HSPD1P11-201ENST00000508643 1702 ntBASIC4.87□□□□□ -1.63
COL4A1P02462 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A1P02462 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A1P02462 SNORA60-201ENST00000362396 134 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.86□□□□□ -1.63
COL4A1P02462 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.86□□□□□ -1.63
COL4A1P02462 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A1P02462 AC108022.1-201ENST00000493466 478 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.86□□□□□ -1.63
COL4A1P02462 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.86□□□□□ -1.63
COL4A1P02462 AC084759.1-201ENST00000561168 290 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 AC083837.1-201ENST00000565297 2994 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 AC020978.9-201ENST00000624380 1141 ntBASIC4.86□□□□□ -1.63
COL4A1P02462 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A1P02462 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL4A1P02462 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
COL4A1P02462 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A1P02462 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL4A1P02462 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A1P02462 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms