Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC069157.1-201ENST00000421749 137 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 HMGB3P5-201ENST00000428894 612 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 YME1L1P1-201ENST00000429435 297 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 RPL7P22-201ENST00000466005 733 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 AC108145.1-201ENST00000503770 153 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.98□□□□□ -1.61
COL2A1P02458 EIF4EP5-201ENST00000528228 640 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 AC090079.2-201ENST00000575289 768 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 MIR4472-2-201ENST00000582069 67 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 AF131215.7-201ENST00000602443 707 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.98□□□□□ -1.61
COL2A1P02458 AL590396.2-201ENST00000636511 1041 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL2A1P02458 EOGT-210ENST00000615922 1931 ntBASIC4.98□□□□□ -1.61
COL2A1P02458 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL2A1P02458 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL2A1P02458 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL2A1P02458 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL2A1P02458 AC063923.1-201ENST00000478982 1619 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.97□□□□□ -1.61
COL2A1P02458 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL2A1P02458 RN7SKP186-201ENST00000365371 303 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 AC093578.1-201ENST00000415219 368 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.97□□□□□ -1.61
COL2A1P02458 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.97□□□□□ -1.61
COL2A1P02458 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.97□□□□□ -1.61
COL2A1P02458 ARAFP2-201ENST00000440565 559 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 BTBD7P2-201ENST00000441962 620 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.97□□□□□ -1.61
COL2A1P02458 AL162151.2-201ENST00000448875 158 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 AC146944.2-203ENST00000502493 354 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 NPM1P41-201ENST00000512920 831 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 AC139495.1-202ENST00000513164 354 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.97□□□□□ -1.61
COL2A1P02458 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.97□□□□□ -1.61
COL2A1P02458 BNIP3P39-201ENST00000601077 554 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 AL451086.1-201ENST00000605596 223 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 AC005086.4-201ENST00000623065 213 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 AC015908.5-201ENST00000623289 343 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 AL138960.2-201ENST00000625145 535 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
COL2A1P02458 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.97□□□□□ -1.61
COL2A1P02458 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.97□□□□□ -1.61
COL2A1P02458 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL2A1P02458 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL2A1P02458 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
COL2A1P02458 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.61
COL2A1P02458 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.96□□□□□ -1.61
COL2A1P02458 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
COL2A1P02458 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
COL2A1P02458 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.96□□□□□ -1.62
COL2A1P02458 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COL2A1P02458 OR11H4-201ENST00000315409 1082 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
COL2A1P02458 MIR1271-201ENST00000408537 86 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.96□□□□□ -1.62
COL2A1P02458 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 RANP7-201ENST00000418085 644 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.96□□□□□ -1.62
COL2A1P02458 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.96□□□□□ -1.62
COL2A1P02458 RPL36AP13-201ENST00000457490 317 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
COL2A1P02458 MORF4L2P1-201ENST00000503761 858 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.96□□□□□ -1.62
COL2A1P02458 RN7SKP46-201ENST00000515942 234 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 AC025423.2-201ENST00000537570 439 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 AC022655.2-201ENST00000577280 318 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 AC053481.4-201ENST00000583164 216 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL2A1P02458 VN1R92P-201ENST00000598511 928 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 AC007179.3-201ENST00000604976 235 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.96□□□□□ -1.62
COL2A1P02458 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COL2A1P02458 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.96□□□□□ -1.62
COL2A1P02458 RLIMP1-201ENST00000339626 1680 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 AC116667.1-201ENST00000604855 2072 ntBASIC4.96□□□□□ -1.62
COL2A1P02458 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.96□□□□□ -1.62
COL2A1P02458 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL2A1P02458 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL2A1P02458 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL2A1P02458 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
COL2A1P02458 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL2A1P02458 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.96□□□□□ -1.62
COL2A1P02458 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL2A1P02458 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COL2A1P02458 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL2A1P02458 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.96□□□□□ -1.62
COL2A1P02458 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL2A1P02458 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL2A1P02458 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.95□□□□□ -1.62
COL2A1P02458 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL2A1P02458 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL2A1P02458 AL359643.1-201ENST00000404109 423 ntBASIC4.95□□□□□ -1.62
COL2A1P02458 SMC4P1-201ENST00000414479 527 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms