Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LMX1BO60663 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.38□□□□□ -1.71
LMX1BO60663 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
LMX1BO60663 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LMX1BO60663 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
LMX1BO60663 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.38□□□□□ -1.71
LMX1BO60663 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.38□□□□□ -1.71
LMX1BO60663 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.38□□□□□ -1.71
LMX1BO60663 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LMX1BO60663 AL672167.1-205ENST00000641112 3080 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMX1BO60663 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMX1BO60663 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LMX1BO60663 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.37□□□□□ -1.71
LMX1BO60663 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC019072.1-201ENST00000604535 1551 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMX1BO60663 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LMX1BO60663 RN7SKP104-201ENST00000362605 328 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.37□□□□□ -1.71
LMX1BO60663 SNORA77-201ENST00000408716 125 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.37□□□□□ -1.71
LMX1BO60663 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.37□□□□□ -1.71
LMX1BO60663 QRSL1P2-201ENST00000418582 964 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 GTF2IP3-201ENST00000433887 494 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AC073052.1-201ENST00000440417 714 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AL450023.3-201ENST00000440592 271 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.37□□□□□ -1.71
LMX1BO60663 SEPT7P3-201ENST00000455017 621 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 PTGES3P5-201ENST00000455109 434 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.37□□□□□ -1.71
LMX1BO60663 RPL6P9-201ENST00000466502 859 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.37□□□□□ -1.71
LMX1BO60663 RPL21P131-201ENST00000497298 483 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.37□□□□□ -1.71
LMX1BO60663 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.37□□□□□ -1.71
LMX1BO60663 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC010486.2-201ENST00000505572 483 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMX1BO60663 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC010486.3-201ENST00000511602 785 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMX1BO60663 RNU6-1028P-201ENST00000517164 93 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.37□□□□□ -1.71
LMX1BO60663 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.37□□□□□ -1.71
LMX1BO60663 OR4A2P-201ENST00000527276 913 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC137768.1-201ENST00000549998 553 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AL442163.2-201ENST00000553912 710 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 MTND4P33-201ENST00000556706 766 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC079075.1-201ENST00000559543 878 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.37□□□□□ -1.71
LMX1BO60663 AGGF1P6-201ENST00000569213 976 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 MIR4472-2-201ENST00000582069 67 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.37□□□□□ -1.71
LMX1BO60663 AC012254.4-201ENST00000588843 273 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.37□□□□□ -1.71
LMX1BO60663 AL035411.2-201ENST00000604022 421 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 Z82195.1-201ENST00000604558 398 ntBASIC4.37□□□□□ -1.71
LMX1BO60663 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMX1BO60663 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
LMX1BO60663 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.37□□□□□ -1.71
LMX1BO60663 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.37□□□□□ -1.71
LMX1BO60663 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LMX1BO60663 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.36□□□□□ -1.71
LMX1BO60663 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.36□□□□□ -1.71
LMX1BO60663 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMX1BO60663 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.36□□□□□ -1.71
LMX1BO60663 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMX1BO60663 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMX1BO60663 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMX1BO60663 HSPD1P11-201ENST00000508643 1702 ntBASIC4.36□□□□□ -1.71
LMX1BO60663 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
LMX1BO60663 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.36□□□□□ -1.71
LMX1BO60663 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LMX1BO60663 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMX1BO60663 SNURFL-201ENST00000309296 343 ntBASIC4.36□□□□□ -1.71
LMX1BO60663 SNORA70.10-201ENST00000384515 134 ntBASIC4.36□□□□□ -1.71
LMX1BO60663 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMX1BO60663 AL021331.1-201ENST00000402817 582 ntBASIC4.36□□□□□ -1.71
LMX1BO60663 RPS4XP9-201ENST00000405151 780 ntBASIC4.36□□□□□ -1.71
LMX1BO60663 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.36□□□□□ -1.71
LMX1BO60663 GJA6P-201ENST00000415117 1042 ntBASIC4.36□□□□□ -1.71
LMX1BO60663 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMX1BO60663 BTF3P9-201ENST00000418784 283 ntBASIC4.36□□□□□ -1.71
LMX1BO60663 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.36□□□□□ -1.71
LMX1BO60663 HIGD1AP4-201ENST00000430194 280 ntBASIC4.36□□□□□ -1.71
LMX1BO60663 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.36□□□□□ -1.71
LMX1BO60663 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms