Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.44□□□□□ -1.7
PRKNO60260 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.44□□□□□ -1.7
PRKNO60260 PSMC1P13-201ENST00000458195 985 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC007686.1-201ENST00000488511 463 ntBASIC4.44□□□□□ -1.7
PRKNO60260 RPS23P1-201ENST00000491662 432 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC104971.1-201ENST00000495117 578 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.44□□□□□ -1.7
PRKNO60260 AC020699.1-201ENST00000505161 445 ntBASIC4.44□□□□□ -1.7
PRKNO60260 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.44□□□□□ -1.7
PRKNO60260 HPRT1P1-201ENST00000509498 657 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.44□□□□□ -1.7
PRKNO60260 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.44□□□□□ -1.7
PRKNO60260 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.44□□□□□ -1.7
PRKNO60260 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.44□□□□□ -1.7
PRKNO60260 OR8K4P-201ENST00000534608 872 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC137768.1-201ENST00000549998 553 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AL049870.4-201ENST00000555741 486 ntBASIC4.44□□□□□ -1.7
PRKNO60260 CYCSP40-201ENST00000575927 294 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.44□□□□□ -1.7
PRKNO60260 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.44□□□□□ -1.7
PRKNO60260 AC073387.2-201ENST00000604797 784 ntBASIC4.44□□□□□ -1.7
PRKNO60260 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.44□□□□□ -1.7
PRKNO60260 RNU4-5P-201ENST00000607255 135 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AL161616.1-201ENST00000611867 286 ntBASIC4.44□□□□□ -1.7
PRKNO60260 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
PRKNO60260 AC012414.7-202ENST00000622705 1090 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC138965.3-201ENST00000623875 498 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AC006963.1-201ENST00000624003 1052 ntBASIC4.44□□□□□ -1.7
PRKNO60260 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.44□□□□□ -1.7
PRKNO60260 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.44□□□□□ -1.7
PRKNO60260 AL672167.1-204ENST00000641875 3017 ntBASIC4.44□□□□□ -1.7
PRKNO60260 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.44□□□□□ -1.7
PRKNO60260 AL132640.2-201ENST00000559968 1698 ntBASIC4.44□□□□□ -1.7
PRKNO60260 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRKNO60260 AC027228.2-201ENST00000567141 2154 ntBASIC4.44□□□□□ -1.7
PRKNO60260 SMG1P6-201ENST00000532337 2930 ntBASIC4.44□□□□□ -1.7
PRKNO60260 SPATA2P1-201ENST00000431223 2055 ntBASIC4.44□□□□□ -1.7
PRKNO60260 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.44□□□□□ -1.7
PRKNO60260 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRKNO60260 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.44□□□□□ -1.7
PRKNO60260 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.43□□□□□ -1.7
PRKNO60260 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.43□□□□□ -1.7
PRKNO60260 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.43□□□□□ -1.7
PRKNO60260 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 AL590240.1-201ENST00000334118 313 ntBASIC4.43□□□□□ -1.7
PRKNO60260 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PRKNO60260 AC007738.1-201ENST00000413892 348 ntBASIC4.43□□□□□ -1.7
PRKNO60260 MTATP6P20-201ENST00000414147 562 ntBASIC4.43□□□□□ -1.7
PRKNO60260 AL592310.1-201ENST00000414330 671 ntBASIC4.43□□□□□ -1.7
PRKNO60260 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.43□□□□□ -1.7
PRKNO60260 EIF4A1P1-201ENST00000420241 934 ntBASIC4.43□□□□□ -1.7
PRKNO60260 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
PRKNO60260 FO393419.3-201ENST00000428741 282 ntBASIC4.43□□□□□ -1.7
PRKNO60260 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 MTND2P5-201ENST00000432656 1006 ntBASIC4.43□□□□□ -1.7
PRKNO60260 HMGB3P10-201ENST00000434734 572 ntBASIC4.43□□□□□ -1.7
PRKNO60260 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 CYCSP11-201ENST00000436426 315 ntBASIC4.43□□□□□ -1.7
PRKNO60260 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 BTF3P6-201ENST00000448054 499 ntBASIC4.43□□□□□ -1.7
PRKNO60260 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 Z95152.1-201ENST00000453556 656 ntBASIC4.43□□□□□ -1.7
PRKNO60260 RPS5P7-201ENST00000456664 608 ntBASIC4.43□□□□□ -1.7
PRKNO60260 RPS29P33-201ENST00000456717 146 ntBASIC4.43□□□□□ -1.7
PRKNO60260 HSPE1P22-201ENST00000456856 327 ntBASIC4.43□□□□□ -1.7
PRKNO60260 AC020898.1-201ENST00000474167 787 ntBASIC4.43□□□□□ -1.7
PRKNO60260 RPL12P20-201ENST00000475538 479 ntBASIC4.43□□□□□ -1.7
PRKNO60260 RPS4XP6-201ENST00000477670 797 ntBASIC4.43□□□□□ -1.7
PRKNO60260 COX6B1P2-201ENST00000489624 230 ntBASIC4.43□□□□□ -1.7
PRKNO60260 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 RNU2-30P-201ENST00000516209 141 ntBASIC4.43□□□□□ -1.7
PRKNO60260 Y_RNA.719-201ENST00000517156 106 ntBASIC4.43□□□□□ -1.7
PRKNO60260 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.43□□□□□ -1.7
PRKNO60260 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 OR5M2P-201ENST00000529003 936 ntBASIC4.43□□□□□ -1.7
PRKNO60260 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.43□□□□□ -1.7
PRKNO60260 BNIP3P1-201ENST00000547295 580 ntBASIC4.43□□□□□ -1.7
PRKNO60260 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 FKBP1BP1-201ENST00000553366 325 ntBASIC4.43□□□□□ -1.7
PRKNO60260 ZNF971P-201ENST00000562068 1249 ntBASIC4.43□□□□□ -1.7
PRKNO60260 AC009712.1-201ENST00000564938 316 ntBASIC4.43□□□□□ -1.7
PRKNO60260 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.43□□□□□ -1.7
PRKNO60260 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.43□□□□□ -1.7
PRKNO60260 AL450336.1-201ENST00000605180 586 ntBASIC4.43□□□□□ -1.7
PRKNO60260 uc_338.18-201ENST00000615451 175 ntBASIC4.43□□□□□ -1.7
PRKNO60260 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRKNO60260 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.43□□□□□ -1.7
PRKNO60260 AC010435.1-201ENST00000623353 1177 ntBASIC4.43□□□□□ -1.7
PRKNO60260 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.43□□□□□ -1.7
PRKNO60260 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.43□□□□□ -1.7
PRKNO60260 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms