Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.96□□□□□ -1.62
SMAD6O43541 HMGB3P9-201ENST00000441799 583 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.96□□□□□ -1.62
SMAD6O43541 SLC25A18P1-201ENST00000449385 454 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AP002345.1-201ENST00000456493 928 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 NIP7P2-201ENST00000485801 544 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC008427.1-201ENST00000503102 655 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.96□□□□□ -1.62
SMAD6O43541 AC010476.1-201ENST00000519111 851 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AL356057.1-201ENST00000533798 831 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.96□□□□□ -1.62
SMAD6O43541 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.96□□□□□ -1.62
SMAD6O43541 AL049839.1-201ENST00000556151 657 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 MIR4700-201ENST00000578311 74 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 MIR3667-201ENST00000581025 74 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 FAM106CP-201ENST00000582212 507 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 MIMT1-201ENST00000597105 1050 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC010620.1-201ENST00000601088 1102 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC010424.2-201ENST00000607594 443 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 OR7A19P-201ENST00000608051 733 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC021851.1-201ENST00000608537 1082 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AC007497.1-201ENST00000610421 561 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 MIR1264-201ENST00000616374 69 ntBASIC4.96□□□□□ -1.62
SMAD6O43541 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SMAD6O43541 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.96□□□□□ -1.62
SMAD6O43541 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.96□□□□□ -1.62
SMAD6O43541 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SMAD6O43541 AC008758.3-201ENST00000507003 1829 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
SMAD6O43541 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SMAD6O43541 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.95□□□□□ -1.62
SMAD6O43541 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 RPL22P18-201ENST00000417197 377 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 USP9YP21-201ENST00000420603 432 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 ARL2BPP3-201ENST00000421226 480 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.95□□□□□ -1.62
SMAD6O43541 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.95□□□□□ -1.62
SMAD6O43541 USP9YP9-201ENST00000429406 715 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.95□□□□□ -1.62
SMAD6O43541 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.95□□□□□ -1.62
SMAD6O43541 RPL36AP15-201ENST00000444514 266 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.95□□□□□ -1.62
SMAD6O43541 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.95□□□□□ -1.62
SMAD6O43541 AC012512.1-201ENST00000446594 718 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.95□□□□□ -1.62
SMAD6O43541 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 RPS6P2-201ENST00000454208 705 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.95□□□□□ -1.62
SMAD6O43541 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.95□□□□□ -1.62
SMAD6O43541 PRDX3P4-201ENST00000470828 747 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 OR9N1P-202ENST00000494289 481 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.95□□□□□ -1.62
SMAD6O43541 AC112518.2-201ENST00000508565 425 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.95□□□□□ -1.62
SMAD6O43541 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.95□□□□□ -1.62
SMAD6O43541 AC109635.6-201ENST00000525487 1113 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AP001880.2-201ENST00000538233 448 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.95□□□□□ -1.62
SMAD6O43541 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.95□□□□□ -1.62
SMAD6O43541 UBE2FP2-201ENST00000566646 462 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 AP000919.1-202ENST00000581139 1264 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AL139344.1-201ENST00000605228 195 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AC090425.2-201ENST00000608818 501 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AC131238.1-201ENST00000617135 328 ntBASIC4.95□□□□□ -1.62
SMAD6O43541 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.95□□□□□ -1.62
SMAD6O43541 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SMAD6O43541 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SMAD6O43541 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SMAD6O43541 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms