Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK2O43353 U8.4-201ENST00000363626 134 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 RNU1-87P-201ENST00000363727 170 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 RNU4-4P-201ENST00000364588 130 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.54□□□□□ -1.68
RIPK2O43353 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK2O43353 RNU6-171P-201ENST00000384354 107 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.54□□□□□ -1.68
RIPK2O43353 AL160175.1-201ENST00000428124 247 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 NRBF2P3-201ENST00000432731 865 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 MTCO1P52-201ENST00000433928 531 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 XKRYP6-201ENST00000440468 1116 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 XKRYP3-201ENST00000442113 1116 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 OR52J1P-201ENST00000450596 932 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 RPL7P51-201ENST00000490532 749 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.54□□□□□ -1.68
RIPK2O43353 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.54□□□□□ -1.68
RIPK2O43353 HMGB3P13-201ENST00000511263 607 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 HMGB1P47-201ENST00000511281 589 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.54□□□□□ -1.68
RIPK2O43353 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RIPK2O43353 OR5M7P-201ENST00000526140 972 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 PHBP17-201ENST00000528576 541 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.54□□□□□ -1.68
RIPK2O43353 AL110118.1-201ENST00000553543 400 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.54□□□□□ -1.68
RIPK2O43353 AC005034.4-201ENST00000603612 899 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.54□□□□□ -1.68
RIPK2O43353 AC009163.6-201ENST00000612367 342 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.54□□□□□ -1.68
RIPK2O43353 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK2O43353 MAPK10-253ENST00000641010 4072 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 USP9YP4-201ENST00000424401 1745 ntBASIC4.54□□□□□ -1.68
RIPK2O43353 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RIPK2O43353 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK2O43353 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK2O43353 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK2O43353 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RIPK2O43353 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK2O43353 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RIPK2O43353 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.53□□□□□ -1.68
RIPK2O43353 AL353743.4-201ENST00000422653 1547 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK2O43353 SNORA62.2-201ENST00000364672 152 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RIPK2O43353 MIR621-201ENST00000384919 96 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.53□□□□□ -1.68
RIPK2O43353 AP000534.2-201ENST00000412729 568 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AL512504.1-201ENST00000415494 778 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AC004552.1-201ENST00000419089 348 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.53□□□□□ -1.68
RIPK2O43353 MED6P1-201ENST00000439659 713 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AL606490.8-201ENST00000441624 319 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 ABCF2P2-201ENST00000450549 296 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AC012671.1-201ENST00000451912 203 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.53□□□□□ -1.68
RIPK2O43353 RPS26P3-201ENST00000470205 348 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AC090543.2-201ENST00000483963 348 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AC004057.1-201ENST00000485827 348 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 PARP4P3-201ENST00000510265 317 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.53□□□□□ -1.68
RIPK2O43353 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
RIPK2O43353 OR5AZ1P-201ENST00000527448 943 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK2O43353 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.53□□□□□ -1.68
RIPK2O43353 AP001880.2-201ENST00000538233 448 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AC008033.2-201ENST00000542626 177 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AP001542.1-201ENST00000591314 200 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 AC091905.4-201ENST00000623432 202 ntBASIC4.53□□□□□ -1.68
RIPK2O43353 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.53□□□□□ -1.68
RIPK2O43353 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.53□□□□□ -1.68
RIPK2O43353 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK2O43353 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK2O43353 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RIPK2O43353 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RIPK2O43353 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK2O43353 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RIPK2O43353 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.53□□□□□ -1.69
RIPK2O43353 MTND4P26-201ENST00000415971 1359 ntBASIC4.53□□□□□ -1.69
RIPK2O43353 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK2O43353 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK2O43353 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.52□□□□□ -1.69
RIPK2O43353 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.52□□□□□ -1.69
RIPK2O43353 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK2O43353 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK2O43353 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK2O43353 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.52□□□□□ -1.69
RIPK2O43353 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK2O43353 NOL8P1-201ENST00000508336 3529 ntBASIC4.52□□□□□ -1.69
RIPK2O43353 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.52□□□□□ -1.69
RIPK2O43353 AC006042.3-201ENST00000454684 1469 ntBASIC4.52□□□□□ -1.69
RIPK2O43353 AC021146.4-201ENST00000309229 279 ntBASIC4.52□□□□□ -1.69
RIPK2O43353 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK2O43353 RNA5SP191-201ENST00000362585 102 ntBASIC4.52□□□□□ -1.69
RIPK2O43353 AL391361.1-201ENST00000405580 489 ntBASIC4.52□□□□□ -1.69
RIPK2O43353 SNORA11.5-201ENST00000408163 128 ntBASIC4.52□□□□□ -1.69
RIPK2O43353 MIR1911-201ENST00000410783 80 ntBASIC4.52□□□□□ -1.69
RIPK2O43353 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.52□□□□□ -1.69
RIPK2O43353 MTND2P8-201ENST00000450555 1025 ntBASIC4.52□□□□□ -1.69
RIPK2O43353 AP002345.1-201ENST00000456493 928 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms