Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.77□□□□□ -1.65
MSH4O15457 AC005008.1-201ENST00000456151 612 ntBASIC4.77□□□□□ -1.65
MSH4O15457 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.77□□□□□ -1.65
MSH4O15457 NPM1P29-201ENST00000483112 803 ntBASIC4.77□□□□□ -1.65
MSH4O15457 RPS27AP13-201ENST00000498403 237 ntBASIC4.77□□□□□ -1.65
MSH4O15457 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.77□□□□□ -1.65
MSH4O15457 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.77□□□□□ -1.65
MSH4O15457 RNA5SP360-201ENST00000516555 118 ntBASIC4.77□□□□□ -1.65
MSH4O15457 AC008694.2-201ENST00000517591 306 ntBASIC4.77□□□□□ -1.65
MSH4O15457 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.77□□□□□ -1.65
MSH4O15457 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.77□□□□□ -1.65
MSH4O15457 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MSH4O15457 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.77□□□□□ -1.65
MSH4O15457 AC027176.2-201ENST00000559166 746 ntBASIC4.77□□□□□ -1.65
MSH4O15457 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.77□□□□□ -1.65
MSH4O15457 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.77□□□□□ -1.65
MSH4O15457 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
MSH4O15457 AL122125.1-201ENST00000616999 600 ntBASIC4.77□□□□□ -1.65
MSH4O15457 TMEM30CP-203ENST00000637814 1035 ntBASIC4.77□□□□□ -1.65
MSH4O15457 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MSH4O15457 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.77□□□□□ -1.65
MSH4O15457 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.77□□□□□ -1.65
MSH4O15457 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MSH4O15457 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MSH4O15457 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MSH4O15457 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.76□□□□□ -1.65
MSH4O15457 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.76□□□□□ -1.65
MSH4O15457 RNU1-15P-201ENST00000353977 144 ntBASIC4.76□□□□□ -1.65
MSH4O15457 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
MSH4O15457 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.76□□□□□ -1.65
MSH4O15457 RBMY1KP-201ENST00000423480 476 ntBASIC4.76□□□□□ -1.65
MSH4O15457 COX6CP15-201ENST00000426313 211 ntBASIC4.76□□□□□ -1.65
MSH4O15457 AC073335.1-201ENST00000427776 363 ntBASIC4.76□□□□□ -1.65
MSH4O15457 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.76□□□□□ -1.65
MSH4O15457 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.76□□□□□ -1.65
MSH4O15457 PSMC1P13-201ENST00000458195 985 ntBASIC4.76□□□□□ -1.65
MSH4O15457 AC079804.1-201ENST00000461922 436 ntBASIC4.76□□□□□ -1.65
MSH4O15457 RPL7P19-201ENST00000469948 618 ntBASIC4.76□□□□□ -1.65
MSH4O15457 RPS29P19-201ENST00000479709 171 ntBASIC4.76□□□□□ -1.65
MSH4O15457 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
MSH4O15457 AC093267.1-201ENST00000489176 961 ntBASIC4.76□□□□□ -1.65
MSH4O15457 BNIP3P41-201ENST00000503774 571 ntBASIC4.76□□□□□ -1.65
MSH4O15457 PRELID3BP5-201ENST00000508612 460 ntBASIC4.76□□□□□ -1.65
MSH4O15457 IGLV3-26-201ENST00000520756 302 ntBASIC4.76□□□□□ -1.65
MSH4O15457 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.76□□□□□ -1.65
MSH4O15457 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.76□□□□□ -1.65
MSH4O15457 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.76□□□□□ -1.65
MSH4O15457 GMCL1P2-201ENST00000605230 823 ntBASIC4.76□□□□□ -1.65
MSH4O15457 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.76□□□□□ -1.65
MSH4O15457 AC023509.5-201ENST00000617434 807 ntBASIC4.76□□□□□ -1.65
MSH4O15457 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.76□□□□□ -1.65
MSH4O15457 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.76□□□□□ -1.65
MSH4O15457 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
MSH4O15457 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MSH4O15457 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSH4O15457 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
MSH4O15457 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSH4O15457 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSH4O15457 SNORA70C-201ENST00000384538 135 ntBASIC4.75□□□□□ -1.65
MSH4O15457 HDGFP1-201ENST00000405943 252 ntBASIC4.75□□□□□ -1.65
MSH4O15457 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.75□□□□□ -1.65
MSH4O15457 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.75□□□□□ -1.65
MSH4O15457 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.75□□□□□ -1.65
MSH4O15457 TPTE2P1-204ENST00000435256 593 ntBASIC4.75□□□□□ -1.65
MSH4O15457 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.75□□□□□ -1.65
MSH4O15457 HMGN1P8-201ENST00000463578 288 ntBASIC4.75□□□□□ -1.65
MSH4O15457 AC103987.1-201ENST00000473394 348 ntBASIC4.75□□□□□ -1.65
MSH4O15457 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
MSH4O15457 AF213884.1-201ENST00000488102 463 ntBASIC4.75□□□□□ -1.65
MSH4O15457 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.75□□□□□ -1.65
MSH4O15457 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.75□□□□□ -1.65
MSH4O15457 AC021146.3-201ENST00000511911 260 ntBASIC4.75□□□□□ -1.65
MSH4O15457 NPM1P6-201ENST00000521088 871 ntBASIC4.75□□□□□ -1.65
MSH4O15457 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.75□□□□□ -1.65
MSH4O15457 AC105233.3-201ENST00000531125 744 ntBASIC4.75□□□□□ -1.65
MSH4O15457 EIF1AXP2-201ENST00000555940 413 ntBASIC4.75□□□□□ -1.65
MSH4O15457 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.75□□□□□ -1.65
MSH4O15457 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.75□□□□□ -1.65
MSH4O15457 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.75□□□□□ -1.65
MSH4O15457 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.75□□□□□ -1.65
MSH4O15457 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.75□□□□□ -1.65
MSH4O15457 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.75□□□□□ -1.65
MSH4O15457 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MSH4O15457 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSH4O15457 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSH4O15457 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MSH4O15457 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MSH4O15457 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MSH4O15457 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
MSH4O15457 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MSH4O15457 RNU1-94P-201ENST00000362627 173 ntBASIC4.74□□□□□ -1.65
MSH4O15457 RNU6-249P-201ENST00000363016 102 ntBASIC4.74□□□□□ -1.65
MSH4O15457 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
MSH4O15457 RNU6-1263P-201ENST00000384601 106 ntBASIC4.74□□□□□ -1.65
MSH4O15457 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.74□□□□□ -1.65
MSH4O15457 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MSH4O15457 SNORA79B-201ENST00000410557 148 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms