Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 OR4F13P-201ENST00000428478 931 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 OR6C71P-201ENST00000432580 913 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 AC006011.1-201ENST00000442758 349 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 AC090589.1-201ENST00000473109 362 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 RPS29P19-201ENST00000479709 171 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 UBE2CP3-201ENST00000502715 450 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 OR8I1P-201ENST00000529291 931 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 AC027455.1-201ENST00000574104 594 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 RPS4XP12-201ENST00000461747 709 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RGPD3A6NKT7 AC090686.1-201ENST00000481577 749 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 HMGB2P1-201ENST00000591146 634 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 AC005344.1-201ENST00000613391 459 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 AF001550.2-201ENST00000636643 217 ntBASIC5.27□□□□□ -1.57
RGPD3A6NKT7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 AL122016.1-201ENST00000403365 367 ntBASIC5.26□□□□□ -1.57
RGPD3A6NKT7 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 AC006064.5-201ENST00000541782 248 ntBASIC5.26□□□□□ -1.57
RGPD3A6NKT7 CYCSP30-201ENST00000546447 172 ntBASIC5.26□□□□□ -1.57
RGPD3A6NKT7 AC114878.2-201ENST00000604863 1251 ntBASIC5.26□□□□□ -1.57
RGPD3A6NKT7 AC243654.2-201ENST00000612843 443 ntBASIC5.26□□□□□ -1.57
RGPD3A6NKT7 AC009229.4-201ENST00000623854 1947 ntBASIC5.26□□□□□ -1.57
RGPD3A6NKT7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RGPD3A6NKT7 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 THAP12P5-201ENST00000405864 2275 ntBASIC5.25□□□□□ -1.57
RGPD3A6NKT7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 SNORA60-201ENST00000362396 134 ntBASIC5.25□□□□□ -1.57
RGPD3A6NKT7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 NMNAT1P2-201ENST00000435192 860 ntBASIC5.25□□□□□ -1.57
RGPD3A6NKT7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 AC098799.1-201ENST00000504752 800 ntBASIC5.25□□□□□ -1.57
RGPD3A6NKT7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 AL160290.3-201ENST00000604869 165 ntBASIC5.25□□□□□ -1.57
RGPD3A6NKT7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RGPD3A6NKT7 HMGN2P27-201ENST00000427352 270 ntBASIC5.24□□□□□ -1.57
RGPD3A6NKT7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 HSPD1P15-201ENST00000505573 1122 ntBASIC5.24□□□□□ -1.57
RGPD3A6NKT7 AC138832.1-201ENST00000522871 556 ntBASIC5.24□□□□□ -1.57
RGPD3A6NKT7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 ZNF833P-201ENST00000424938 1494 ntBASIC5.24□□□□□ -1.57
RGPD3A6NKT7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 PRO1804-201ENST00000623780 2050 ntBASIC5.24□□□□□ -1.57
RGPD3A6NKT7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.24□□□□□ -1.57
RGPD3A6NKT7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms