Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.47□□□□□ -1.69
TRABD2BA6NFA1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TRABD2BA6NFA1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRABD2BA6NFA1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.46□□□□□ -1.69
TRABD2BA6NFA1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRABD2BA6NFA1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TRABD2BA6NFA1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TRABD2BA6NFA1 SALL4P2-201ENST00000423288 2910 ntBASIC4.46□□□□□ -1.69
TRABD2BA6NFA1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.46□□□□□ -1.69
TRABD2BA6NFA1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AC108467.2-201ENST00000617640 1597 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 SNORA11F-201ENST00000408237 128 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AC019070.1-201ENST00000415008 1024 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 RPS15AP29-201ENST00000445539 400 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AL445433.1-201ENST00000457507 257 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 RPS7P7-201ENST00000463499 571 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 RN7SL810P-201ENST00000493031 276 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 MTND4LP31-201ENST00000514859 294 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 RNU6-760P-201ENST00000516078 97 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 OR8R1P-201ENST00000543943 764 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AL356863.1-201ENST00000623378 1080 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 U3.53-201ENST00000628922 216 ntBASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRABD2BA6NFA1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 SNORA68.2-201ENST00000391263 128 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 PTP4A1P1-201ENST00000420539 515 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 CR848007.2-201ENST00000424918 787 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 ARL5AP3-201ENST00000439327 386 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 ACTR3P2-201ENST00000439585 1257 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 MTCO3P43-201ENST00000440974 771 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AL157884.3-201ENST00000448273 1184 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 RPS17P2-201ENST00000461663 408 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC025181.1-201ENST00000477507 416 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 RN7SL558P-201ENST00000497468 299 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 PCNAP1-201ENST00000505363 709 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 OR8G5-201ENST00000524943 1041 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC116553.2-201ENST00000564203 463 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 SNORD91B-202ENST00000608459 222 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 AC084036.1-201ENST00000609190 508 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 LINC00216-201ENST00000623548 1126 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 DDX18P3-201ENST00000404856 2007 ntBASIC4.45□□□□□ -1.7
TRABD2BA6NFA1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRABD2BA6NFA1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.44□□□□□ -1.7
TRABD2BA6NFA1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.44□□□□□ -1.7
TRABD2BA6NFA1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.44□□□□□ -1.7
TRABD2BA6NFA1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.44□□□□□ -1.7
TRABD2BA6NFA1 MAPK10-286ENST00000641208 8747 ntBASIC4.44□□□□□ -1.7
TRABD2BA6NFA1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.44□□□□□ -1.7
TRABD2BA6NFA1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
TRABD2BA6NFA1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRABD2BA6NFA1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms