Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AL138721.1-201ENST00000616756 179 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 VPS35P1-201ENST00000563400 1518 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 HSPD1P11-201ENST00000508643 1702 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 OR56B2P-202ENST00000641377 2453 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 Z73965.1-201ENST00000623412 2297 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC027287.1-201ENST00000553115 1453 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC083899.2-201ENST00000423285 1376 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 RNA5SP307-201ENST00000362863 116 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 MIR659-201ENST00000384963 97 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 GLULP6-201ENST00000399502 913 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AL078604.1-201ENST00000404609 466 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 SNORA74C-2-201ENST00000411179 201 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AMD1P2-201ENST00000412936 992 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC119751.6-201ENST00000416712 186 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 NPM1P26-201ENST00000426339 738 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AP001324.1-201ENST00000428553 399 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 RPL7P4-203ENST00000430239 730 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 ARL2BPP10-201ENST00000446487 531 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 RPL23AP71-201ENST00000470966 469 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC007448.1-201ENST00000582714 234 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC008782.1-201ENST00000603386 430 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC010201.1-201ENST00000605051 540 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AL135786.2-201ENST00000608422 615 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC100847.1-201ENST00000611316 481 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AC007546.2-201ENST00000623996 360 ntBASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DRB4X5D2U9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 RNU1-15P-201ENST00000353977 144 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 RNU6-1279P-201ENST00000383917 103 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC099336.2-201ENST00000422457 254 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 RWDD4P2-201ENST00000426392 563 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 CDY14P-201ENST00000431260 1014 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 RPS6P12-201ENST00000432491 726 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AL138878.2-201ENST00000440581 1241 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 CDY12P-201ENST00000440679 1015 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 CDY13P-201ENST00000445813 1015 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 CDY23P-201ENST00000451661 1014 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC099560.2-201ENST00000457554 255 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 RPS27AP17-201ENST00000463344 455 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 RWDD4P1-201ENST00000488019 565 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 RN7SL812P-201ENST00000493791 279 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.3□□□□□ -1.88
HLA-DRB4X5D2U9 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms