Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC134698.5-201ENST00000519444 336 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC090151.1-201ENST00000520784 730 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AP000676.2-201ENST00000529711 301 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC092868.3-201ENST00000560515 784 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SL652P-201ENST00000577769 300 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 NF1P5-201ENST00000588287 448 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AL512782.1-201ENST00000603093 364 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC013244.1-201ENST00000604279 193 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AL391358.1-201ENST00000605342 190 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC211433.2-201ENST00000608433 387 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC135352.1-201ENST00000506173 1418 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 MFSD8-220ENST00000641243 1422 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC015813.6-201ENST00000624409 5808 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 RNU1-87P-201ENST00000363727 170 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC136624.1-201ENST00000400791 413 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 HDGFP1-201ENST00000405943 252 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 RPL21P108-201ENST00000413857 481 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AL606490.7-201ENST00000433136 191 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 TPMTP4-201ENST00000450749 678 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 HIGD1AP8-201ENST00000453927 274 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC090013.1-201ENST00000485147 480 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 UBE2Q2P10-201ENST00000514854 900 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC124068.1-201ENST00000563131 678 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC027455.1-201ENST00000574104 594 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 MIR3934-201ENST00000579806 107 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AP002360.3-201ENST00000607673 710 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 MIR7973-1-201ENST00000614683 76 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 MIR7154-201ENST00000620673 73 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 AC134882.1-201ENST00000603738 1676 ntBASIC4□□□□□ -1.77
RHBDD3Q9Y3P4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SKP115-201ENST00000363177 317 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SKP100-201ENST00000411258 284 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC140479.3-201ENST00000418944 1126 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC104837.2-201ENST00000427236 424 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 Z85994.2-201ENST00000434327 452 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 CEACAMP1-201ENST00000434624 1035 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 VN1R54P-201ENST00000435210 1049 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC005154.2-201ENST00000438110 379 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms