Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHANK2Q9UPX8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 EOGT-210ENST00000615922 1931 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC073346.2-201ENST00000624724 2058 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 PTMAP5-201ENST00000393073 333 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC022336.1-201ENST00000475510 337 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC026403.1-201ENST00000518938 295 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 RPL21P12-201ENST00000559810 515 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC087499.8-201ENST00000578406 226 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 OR2BH1P-201ENST00000608850 864 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC022106.2-201ENST00000620114 757 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC007342.8-201ENST00000623278 678 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC009093.8-201ENST00000641769 292 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 A2MP1-204ENST00000566278 4130 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 AC126323.6-202ENST00000568092 3511 ntBASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SHANK2Q9UPX8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 SNORD66.1-201ENST00000391230 76 ntBASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 AC068533.1-201ENST00000418542 415 ntBASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 HSFY1P1-201ENST00000423928 1178 ntBASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 CYCSP43-201ENST00000438233 310 ntBASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 NOTCH2P1-201ENST00000443481 624 ntBASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 RPL38P1-201ENST00000460914 211 ntBASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 PAICSP4-201ENST00000517543 1253 ntBASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 ERCC6-202ENST00000374127 1782 ntBASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 AC005005.4-201ENST00000623789 16698 ntBASIC6.24□□□□□ -1.41
SHANK2Q9UPX8 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 HSPE1P12-201ENST00000412576 301 ntBASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 USP9YP2-201ENST00000504503 1000 ntBASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 USP9YP1-201ENST00000513521 1002 ntBASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 AC027807.1-201ENST00000559921 996 ntBASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 AC009852.2-201ENST00000567898 485 ntBASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 MIR6500-201ENST00000622700 86 ntBASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHANK2Q9UPX8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AC006042.3-201ENST00000454684 1469 ntBASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AC004448.2-201ENST00000422360 586 ntBASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AC006011.1-201ENST00000442758 349 ntBASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 GMPSP1-201ENST00000514075 579 ntBASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AC016550.3-201ENST00000515706 767 ntBASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AC019278.1-201ENST00000623516 479 ntBASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHANK2Q9UPX8 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms