Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.72□□□□□ -1.49
NPC1L1Q9UHC9 TMEM30CP-203ENST00000637814 1035 ntBASIC5.72□□□□□ -1.49
NPC1L1Q9UHC9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
NPC1L1Q9UHC9 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.72□□□□□ -1.49
NPC1L1Q9UHC9 AC092162.3-201ENST00000624511 1624 ntBASIC5.72□□□□□ -1.49
NPC1L1Q9UHC9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPC1L1Q9UHC9 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPC1L1Q9UHC9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
NPC1L1Q9UHC9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPC1L1Q9UHC9 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPC1L1Q9UHC9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPC1L1Q9UHC9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.71□□□□□ -1.49
NPC1L1Q9UHC9 Z95327.2-201ENST00000414579 1873 ntBASIC5.71□□□□□ -1.49
NPC1L1Q9UHC9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPC1L1Q9UHC9 RNU1-108P-201ENST00000362556 161 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 RNU1-64P-201ENST00000365443 163 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 RNA5SP296-201ENST00000410523 111 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 RPS23P10-201ENST00000416185 486 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 AL161631.1-201ENST00000417933 486 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 MTND6P5-201ENST00000448266 512 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 RPS26P28-201ENST00000470806 348 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 MRPL49P2-201ENST00000521066 465 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 AC115989.2-201ENST00000578640 563 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 ARF4P1-201ENST00000605447 541 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 MIR92B-201ENST00000607575 96 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 AC093591.2-201ENST00000565254 3843 ntBASIC5.71□□□□□ -1.5
NPC1L1Q9UHC9 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 RPL32P23-201ENST00000397237 405 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 AL035696.2-201ENST00000407941 709 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 AL355994.1-201ENST00000424379 260 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 COX6B1P7-201ENST00000430845 235 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 MAPRE1P3-201ENST00000435438 796 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 AL359073.1-201ENST00000448036 403 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 RPL36AP13-201ENST00000457490 317 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 AC105137.1-201ENST00000484355 562 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 MTND6P33-201ENST00000571794 183 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 MIR432-201ENST00000606207 94 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 AC023043.4-201ENST00000612081 449 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 AP003400.2-201ENST00000624036 666 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 AC008785.1-201ENST00000624475 456 ntBASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NPC1L1Q9UHC9 ERCC6-202ENST00000374127 1782 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 RNU1-94P-201ENST00000362627 173 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 RNU1-85P-201ENST00000364127 164 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 AL590806.1-201ENST00000415818 853 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 NUTF2P3-201ENST00000448540 384 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 RPL7P19-201ENST00000469948 618 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 AC027176.2-201ENST00000559166 746 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 QTRT1P1-201ENST00000604344 1078 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 AL031595.2-201ENST00000624215 19071 ntBASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.69□□□□□ -1.5
NPC1L1Q9UHC9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 AL121657.1-201ENST00000327215 531 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 BMS1P19-201ENST00000433925 393 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 AL356276.2-201ENST00000435919 558 ntBASIC5.68□□□□□ -1.5
NPC1L1Q9UHC9 RPS29P19-201ENST00000479709 171 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms