Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC068722.2-201ENST00000618734 544 ntBASIC6.57□□□□□ -1.36
RIMBP3Q9UFD9 AC243312.2-201ENST00000623340 601 ntBASIC6.57□□□□□ -1.36
RIMBP3Q9UFD9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RIMBP3Q9UFD9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RIMBP3Q9UFD9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 AC097713.2-201ENST00000430199 356 ntBASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 AP000563.1-201ENST00000490865 758 ntBASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 Vault.1-201ENST00000516474 102 ntBASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 MIR6868-201ENST00000611215 58 ntBASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.56□□□□□ -1.36
RIMBP3Q9UFD9 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 UBE2V1P2-201ENST00000397758 440 ntBASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 COX5BP7-201ENST00000414780 274 ntBASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 AC006011.1-201ENST00000442758 349 ntBASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 AL133162.1-201ENST00000463228 453 ntBASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 CYCSP40-201ENST00000575927 294 ntBASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 AC244505.7-201ENST00000599675 272 ntBASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIMBP3Q9UFD9 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 RNA5SP120-201ENST00000410900 112 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AC005300.1-201ENST00000428401 373 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AC005326.1-201ENST00000429197 123 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 IGKV2-38-201ENST00000517443 247 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 TTC41P-205ENST00000551270 3963 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AC239868.2-201ENST00000564237 4527 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AL355852.1-201ENST00000454081 1771 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 U1.1-201ENST00000384101 164 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 MIR3945-201ENST00000581853 98 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 AC104763.2-201ENST00000604179 382 ntBASIC6.54□□□□□ -1.36
RIMBP3Q9UFD9 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 OR10J6P-201ENST00000289731 930 ntBASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 RNU1-33P-201ENST00000364249 162 ntBASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 AL035423.1-201ENST00000420331 213 ntBASIC6.53□□□□□ -1.36
RIMBP3Q9UFD9 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms