Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 MRPL35P4-201ENST00000453682 566 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 RNU7-140P-201ENST00000459546 60 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC097484.1-201ENST00000471148 389 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC079203.1-201ENST00000487972 404 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC069304.1-201ENST00000491593 704 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC008885.2-201ENST00000509506 930 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 ATP5LP3-201ENST00000514223 304 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC008494.2-201ENST00000514544 370 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 RN7SKP260-201ENST00000516907 149 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC087897.1-201ENST00000550134 156 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC084757.1-201ENST00000559987 490 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 MTCO1P40-201ENST00000574371 625 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AP001542.2-201ENST00000593141 364 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 CYCSP41-201ENST00000616920 296 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC015804.1-201ENST00000622935 435 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 MIR4302-201ENST00000638058 60 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
BRF2Q9HAW0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
BRF2Q9HAW0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.84□□□□□ -1.64
BRF2Q9HAW0 AC021242.1-201ENST00000507315 2035 ntBASIC4.84□□□□□ -1.64
BRF2Q9HAW0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 CYP1D1P-201ENST00000416662 1433 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC013442.1-201ENST00000397347 228 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 RN7SKP206-201ENST00000410823 293 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 MTND4P3-201ENST00000417829 541 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 OSTCP5-201ENST00000425293 453 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 BX323845.1-201ENST00000432417 179 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AL358794.1-201ENST00000445689 381 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AL031313.1-201ENST00000448435 256 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AL389915.2-201ENST00000454576 441 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AL356981.1-201ENST00000454879 684 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC093166.2-201ENST00000455969 1017 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC096992.1-201ENST00000459808 709 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 GYG1P1-201ENST00000460864 698 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 COPS8P2-201ENST00000473228 627 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC104689.1-201ENST00000473356 768 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 RPS4XP1-201ENST00000482189 787 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC108729.1-201ENST00000487812 947 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC091860.1-201ENST00000505723 432 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 MTND1P8-201ENST00000571424 950 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 MIR4512-201ENST00000583257 77 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC002487.1-201ENST00000604565 994 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AL157392.4-201ENST00000609756 345 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 PART1_2.1-201ENST00000612397 250 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC015914.2-201ENST00000618167 288 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AC243756.2-201ENST00000618406 463 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 MAPK10-304ENST00000641341 3984 ntBASIC4.83□□□□□ -1.64
BRF2Q9HAW0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRF2Q9HAW0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BRF2Q9HAW0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms