Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RNU5D-1-201ENST00000363299 116 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RNU6-501P-201ENST00000364072 100 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RNA5SP433-201ENST00000364491 114 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 MT-TP-201ENST00000387461 68 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RNA5SP105-201ENST00000391123 113 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RNU6-77P-201ENST00000410554 91 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RN7SKP17-201ENST00000411242 351 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC138393.2-201ENST00000414742 246 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RPL21P32-201ENST00000419877 477 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC093698.1-201ENST00000423843 571 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AL365184.2-201ENST00000431139 435 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC069154.1-201ENST00000432914 542 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC000111.3-201ENST00000433478 193 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 MTND3P21-201ENST00000433774 331 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC242426.1-201ENST00000435270 960 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 TRIM60P16-201ENST00000444048 694 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC097463.1-201ENST00000447288 481 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC104306.1-201ENST00000449702 371 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC098824.1-201ENST00000453565 980 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 UBDP1-202ENST00000457888 382 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC138866.2-201ENST00000508650 584 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC022483.1-201ENST00000514020 567 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC046134.1-201ENST00000514454 666 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RNA5SP340-201ENST00000517132 107 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 IGHV3-32-201ENST00000519182 355 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 IGJP1-201ENST00000522682 475 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 CYCSP38-201ENST00000559840 322 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 C8orf59P2-201ENST00000603441 271 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC025449.1-201ENST00000603896 529 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC107214.2-201ENST00000608204 634 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC007497.1-201ENST00000610421 561 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC092266.1-201ENST00000610958 165 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC091834.1-201ENST00000614543 472 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC096861.1-201ENST00000616652 240 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC012150.2-201ENST00000621300 544 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC138649.3-201ENST00000622154 254 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 DUXAP9-208ENST00000622815 614 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AP001052.1-201ENST00000626421 99 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC063952.1-203ENST00000634410 658 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 MIR3688-2-201ENST00000636963 87 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 FAM157B-203ENST00000639350 358 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AL590763.1-201ENST00000398297 1545 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 LYARP1-201ENST00000436977 1501 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 AC093225.1-201ENST00000506867 1408 ntBASIC5.32□□□□□ -1.56
SEC61A2Q9H9S3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms