Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTFDC1Q9BY42 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTFDC1Q9BY42 ABCC13-202ENST00000463099 3842 ntBASIC6.08□□□□□ -1.44
RTFDC1Q9BY42 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTFDC1Q9BY42 AC099786.3-201ENST00000565735 1410 ntBASIC6.08□□□□□ -1.44
RTFDC1Q9BY42 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 ZNF652P1-201ENST00000442420 1309 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 ZNF29P-201ENST00000225587 168 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AL049697.2-201ENST00000403708 294 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 RSU1P3-201ENST00000412878 835 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 RPS7P9-201ENST00000414704 586 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 RPL23AP1-201ENST00000428990 471 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 CDY14P-201ENST00000431260 1014 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 CDY12P-201ENST00000440679 1015 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 CDY13P-201ENST00000445813 1015 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 BX842559.2-201ENST00000451418 605 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 CDY23P-201ENST00000451661 1014 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AC069528.1-202ENST00000482888 637 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 RN7SL441P-201ENST00000492388 296 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AC021193.1-201ENST00000511607 420 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AC098976.1-201ENST00000513014 541 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AC092709.1-201ENST00000521355 1045 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AGGF1P5-201ENST00000567900 919 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 VN1R88P-201ENST00000596787 292 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AC006946.3-201ENST00000609791 756 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AL162574.1-201ENST00000615702 950 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 AC097520.1-201ENST00000624435 385 ntBASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTFDC1Q9BY42 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 RNU6-304P-201ENST00000364855 107 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 RNA5SP223-201ENST00000365174 120 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 RNU6-224P-201ENST00000384055 107 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 MTCO1P56-201ENST00000401674 224 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 ELOCP19-201ENST00000411919 318 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC092648.1-201ENST00000425870 423 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AP001324.1-201ENST00000428553 399 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC009263.1-201ENST00000441193 1239 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 VN1R25P-201ENST00000443385 738 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 MTND1P33-201ENST00000446251 917 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 MTND2P8-201ENST00000450555 1025 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 CEACAMP6-201ENST00000452007 574 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 RPL10P17-201ENST00000453852 316 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC244505.3-201ENST00000454598 187 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 OR52A4P-201ENST00000472867 958 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC010285.3-201ENST00000511668 676 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC093752.1-206ENST00000511823 336 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 snoU109.6-201ENST00000516831 118 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms