Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RSPO3Q9BXY4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.96□□□□□ -1.77
RSPO3Q9BXY4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
RSPO3Q9BXY4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
RSPO3Q9BXY4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AL133243.3-201ENST00000617415 3004 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 MAPK10-286ENST00000641208 8747 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AL157831.1-201ENST00000426134 473 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC073587.1-201ENST00000447093 876 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 RN7SL459P-201ENST00000481078 302 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 IGBP1P5-201ENST00000507524 1000 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 IFITM8P-201ENST00000522529 394 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC006064.5-201ENST00000541782 248 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 PARP1P2-201ENST00000556806 195 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC079791.1-201ENST00000605356 973 ntBASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RSPO3Q9BXY4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 OR5P1P-201ENST00000299512 925 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 SNORA11F-201ENST00000408237 128 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 RPS23P10-201ENST00000416185 486 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 GAPDHP49-201ENST00000421421 961 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 MTND4LP12-201ENST00000448237 295 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 CYCSP42-201ENST00000450823 238 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 RPL5P16-201ENST00000471467 790 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 STRADBP1-201ENST00000478954 1281 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 RN7SL691P-201ENST00000494487 301 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC006499.6-201ENST00000511169 607 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 RN7SKP34-201ENST00000516142 244 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 RN7SKP5-201ENST00000517045 272 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 RPL12P25-202ENST00000598100 674 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC068790.4-201ENST00000602474 263 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC012603.1-201ENST00000606424 528 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC006338.2-201ENST00000616864 791 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC008785.1-201ENST00000624475 456 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 OR56B2P-202ENST00000641377 2453 ntBASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RSPO3Q9BXY4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms