Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 AC010547.7-201ENST00000570323 333 ntBASIC5.29□□□□□ -1.56
RPAP1Q9BWH6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 A2MP1-204ENST00000566278 4130 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AC005261.4-201ENST00000600047 1385 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AC025750.1-201ENST00000399891 379 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 CASKP1-201ENST00000412870 582 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 COX6CP15-201ENST00000426313 211 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 DYNLL1P7-201ENST00000429273 258 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 BMS1P19-201ENST00000433925 393 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AL132765.1-201ENST00000434165 553 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AL450263.2-201ENST00000439400 589 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 SNORA31.9-201ENST00000516429 84 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 Z98200.1-201ENST00000607298 470 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 AC008785.1-201ENST00000624475 456 ntBASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RPAP1Q9BWH6 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 MTCO1P22-201ENST00000604619 1360 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 MAPK10-303ENST00000641324 3959 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 VN1R8P-201ENST00000407739 893 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 GSTM3P2-201ENST00000412746 530 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 SNRPFP1-201ENST00000414761 252 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 UBE2V1P3-201ENST00000439651 417 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 RPS27AP17-201ENST00000463344 455 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 AC113430.1-201ENST00000506872 718 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 AC007546.1-201ENST00000619452 559 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 AC090506.2-201ENST00000624521 419 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 AC055839.1-201ENST00000634467 498 ntBASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RPAP1Q9BWH6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC067945.1-201ENST00000342609 618 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AL161909.1-201ENST00000397390 712 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 VDAC2P1-201ENST00000399358 958 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 RPS24P12-201ENST00000402084 394 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 RPL23AP52-201ENST00000439311 478 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC073587.1-201ENST00000447093 876 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 RPL7L1P1-201ENST00000448259 785 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 RPS20P4-201ENST00000461659 355 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC079804.1-201ENST00000461922 436 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 RPS27AP13-201ENST00000498403 237 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC008958.1-201ENST00000511047 682 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AP001804.2-201ENST00000533932 910 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms