Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC42Q96M95 ELOCP28-201ENST00000590044 317 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 FAM25E-202ENST00000608562 189 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 AC140479.6-201ENST00000633535 357 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC42Q96M95 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC42Q96M95 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CCDC42Q96M95 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC42Q96M95 DHX40P1-201ENST00000588725 1412 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 OR56B2P-202ENST00000641377 2453 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 AC007390.2-201ENST00000606229 3803 ntBASIC4.52□□□□□ -1.69
CCDC42Q96M95 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC42Q96M95 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC42Q96M95 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC42Q96M95 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC42Q96M95 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 AL356387.2-201ENST00000422272 243 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 AC006065.1-201ENST00000422539 802 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 AL157831.1-201ENST00000426134 473 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 AL360081.1-201ENST00000428299 555 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 RPL23AP52-201ENST00000439311 478 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 OR2AF1P-201ENST00000454899 889 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 SYT14P1-201ENST00000481459 721 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 IGKV2-38-201ENST00000517443 247 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 IGLVIV-53-201ENST00000520107 367 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC42Q96M95 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 DUX4L52-201ENST00000549363 777 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 CD24P2-201ENST00000565486 219 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 AC068790.7-201ENST00000602347 528 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 AL159169.2-201ENST00000610061 1269 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 AP002967.1-201ENST00000624203 539 ntBASIC4.51□□□□□ -1.69
CCDC42Q96M95 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC42Q96M95 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC42Q96M95 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC42Q96M95 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
CCDC42Q96M95 AC107021.2-201ENST00000567714 2095 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC42Q96M95 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC42Q96M95 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 USP9YP4-201ENST00000424401 1745 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC42Q96M95 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 AL603766.1-201ENST00000407763 664 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 RNU2-50P-201ENST00000410494 143 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 USP9YP9-201ENST00000429406 715 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 NPM1P48-201ENST00000436002 853 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 TPTE2P3-201ENST00000441562 1189 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 AC110749.1-201ENST00000462007 357 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 AL592156.1-201ENST00000508758 304 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 AL158062.1-201ENST00000619632 745 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 AC095038.2-201ENST00000621464 1070 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 AP005264.7-201ENST00000625003 745 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC42Q96M95 AC018555.1-201ENST00000567548 1980 ntBASIC4.5□□□□□ -1.69
CCDC42Q96M95 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC42Q96M95 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC42Q96M95 HSPD1P11-201ENST00000508643 1702 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 RPL23AP59-201ENST00000399415 461 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 RPEP3-201ENST00000425462 676 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 RPL12P3-201ENST00000440080 396 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 SERPINA7P1-201ENST00000443077 631 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 PHBP16-201ENST00000446318 950 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC42Q96M95 OR52A4P-201ENST00000472867 958 ntBASIC4.49□□□□□ -1.69
CCDC42Q96M95 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms