Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNX18P24-201ENST00000505249 671 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC025458.1-201ENST00000506046 166 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 SCARNA5-201ENST00000516201 276 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC051619.2-201ENST00000559063 397 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC011497.2-201ENST00000600255 639 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC022893.3-201ENST00000607665 437 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC099676.1-201ENST00000608886 657 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 U1.41-201ENST00000617626 165 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC022106.2-201ENST00000620114 757 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC129915.3-201ENST00000634128 948 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.2
TRIM47Q96LD4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
TRIM47Q96LD4 AC079949.2-201ENST00000617117 2933 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 MIR323A-201ENST00000362199 86 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 Y_RNA.149-201ENST00000363558 117 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 Y_RNA.157-201ENST00000363638 102 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 RNU6-707P-201ENST00000364647 95 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 SNORA51.9-201ENST00000384295 124 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AL356967.1-201ENST00000406305 431 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AL450338.1-201ENST00000407987 512 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AL645937.1-202ENST00000421799 937 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 MTCO2P5-201ENST00000422621 426 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 EIF1P3-201ENST00000423841 334 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 RPL23AP19-201ENST00000436229 369 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC097463.1-201ENST00000447288 481 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC104634.1-201ENST00000452720 462 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 PPIAP27-201ENST00000453800 265 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 RPL12P30-201ENST00000488389 499 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 HMGB1P30-201ENST00000492455 606 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 SETP14-201ENST00000497538 873 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 FTH1P9-201ENST00000513251 355 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC008802.1-201ENST00000519121 791 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AP003115.1-201ENST00000569849 463 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 DPPA3P3-201ENST00000603842 430 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AL080274.1-201ENST00000605565 220 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 RNU6-88P-201ENST00000606801 100 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC107214.2-201ENST00000608204 634 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC092266.1-201ENST00000610958 165 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AL080312.2-201ENST00000613001 630 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AL354718.1-201ENST00000619764 589 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AP000648.2-201ENST00000624182 404 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 AC087821.2-201ENST00000637086 450 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 CRYM-AS1-204ENST00000637983 556 ntBASIC7.52□□□□□ -1.21
TRIM47Q96LD4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms