Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 GSTP1P1-201ENST00000548078 319 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AC011492.1-201ENST00000600023 315 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AC233280.2-201ENST00000603917 1070 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AC091979.2-201ENST00000607514 214 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AC112503.1-201ENST00000608436 391 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AC124016.2-201ENST00000610058 665 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 RNU6-1192P-201ENST00000612197 107 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AL121612.2-201ENST00000612261 482 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 RNU6-489P-201ENST00000618289 107 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 AC013437.2-201ENST00000639587 677 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 DDX18P3-201ENST00000404856 2007 ntBASIC4.79□□□□□ -1.64
SLC44A1Q8WWI5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 RNU1-20P-201ENST00000363314 162 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 RNA5SP507-201ENST00000363603 121 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 RNU6-1005P-201ENST00000384519 107 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 RNU6-584P-201ENST00000410350 95 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 VDAC1P9-201ENST00000412766 841 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 CEACAMP8-201ENST00000413902 580 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC106883.1-201ENST00000418805 562 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC241520.1-201ENST00000422654 1099 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 FO393414.1-201ENST00000428697 1184 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AL035458.1-201ENST00000433096 585 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AL606517.1-201ENST00000446914 387 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC005008.1-201ENST00000456151 612 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 RN7SL610P-201ENST00000463845 291 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 GTF2IP9-201ENST00000502460 301 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC069306.1-201ENST00000507006 843 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC010460.2-201ENST00000509054 677 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AF186190.1-201ENST00000517470 480 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC022882.1-201ENST00000532142 501 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 CYCSP28-201ENST00000534284 321 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AL353600.1-201ENST00000608148 251 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 MIR7155-201ENST00000615925 56 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC021106.3-201ENST00000623925 531 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 CR381572.2-201ENST00000624852 397 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 AC139713.2-215ENST00000641428 5037 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 MAPK10-320ENST00000641462 6696 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.78□□□□□ -1.64
SLC44A1Q8WWI5 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 RN7SKP104-201ENST00000362605 328 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 MIR765-201ENST00000390226 114 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 RNA5SP372-201ENST00000390836 115 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 SNORA68.2-201ENST00000391263 128 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AL590762.2-201ENST00000395798 571 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AC010385.1-201ENST00000412374 256 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AL445183.3-201ENST00000414168 502 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 RPL23AP27-201ENST00000415161 451 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 PTP4A1P7-201ENST00000423476 514 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AC093414.1-201ENST00000434712 514 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 PRPF38AP2-201ENST00000438179 851 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 RPSAP50-201ENST00000481955 852 ntBASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.77□□□□□ -1.65
SLC44A1Q8WWI5 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms