Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 RNA5SP119-201ENST00000362715 117 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 VN1R8P-201ENST00000407739 893 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 EIF4A1P3-201ENST00000411521 244 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 OR5BC1P-201ENST00000529327 739 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC011471.1-201ENST00000585766 187 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC113403.1-201ENST00000604910 193 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 LSM1P2-201ENST00000604911 322 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 MIR6075-201ENST00000620782 95 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC090506.2-201ENST00000624521 419 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC012442.3-202ENST00000636742 206 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 SNORA71.3-201ENST00000362582 128 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 SNORA9-201ENST00000384215 133 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 MFSD13B-201ENST00000420133 1290 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC091390.3-201ENST00000426478 338 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 PSMC1P13-201ENST00000458195 985 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC079804.1-201ENST00000461922 436 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 CCNG2P1-201ENST00000549521 1000 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC103968.1-201ENST00000557841 573 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AC027176.2-201ENST00000559166 746 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 AP005262.1-201ENST00000582646 997 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM3Q8TF72 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 ERCC6-202ENST00000374127 1782 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 MAPK10-303ENST00000641324 3959 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 SNORA63.1-201ENST00000362493 131 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 RNA5SP366-201ENST00000365454 123 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 PTMAP2-201ENST00000397627 327 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 NDUFA5P1-201ENST00000433858 341 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 SERPINA7P1-201ENST00000443077 631 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 RPS4XP12-201ENST00000461747 709 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 RPL5P30-201ENST00000465511 891 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 AC090151.1-201ENST00000520784 730 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 OR7E10P-201ENST00000526420 991 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 AGGF1P6-201ENST00000569213 976 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 AC084757.4-201ENST00000616350 526 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 AP003400.2-201ENST00000624036 666 ntBASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM3Q8TF72 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 REREP1Y-201ENST00000422655 198 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 REREP2Y-201ENST00000439103 200 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 RNA5SP246-201ENST00000458909 119 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 RPL7P24-201ENST00000493052 752 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC233702.9-201ENST00000581528 203 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC006116.5-201ENST00000591936 559 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AL583832.1-201ENST00000603227 784 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC092435.4-201ENST00000623012 4159 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 OR13Z1P-201ENST00000416141 834 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms