Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 Y_RNA.296-201ENST00000364930 108 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 Y_RNA.302-201ENST00000364997 102 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 RNU6-474P-201ENST00000384243 107 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 RNU4-70P-201ENST00000384579 139 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 RPS24P12-201ENST00000402084 394 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 RPS7P15-201ENST00000415804 584 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC007568.1-201ENST00000422912 471 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AL035410.1-201ENST00000427409 427 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC024082.2-201ENST00000434771 238 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AL627224.1-201ENST00000448334 444 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 GEMIN2P1-201ENST00000454246 752 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 CCDC11P1-201ENST00000503137 1162 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC022447.3-201ENST00000506865 495 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 SAP18P1-201ENST00000512058 390 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 PSMB7P1-201ENST00000556349 514 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC009220.3-201ENST00000604318 586 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AL136131.3-201ENST00000607600 188 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC243756.2-201ENST00000618406 463 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AL158801.5-201ENST00000623123 465 ntBASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD1Q8NHV4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC012254.3-201ENST00000591183 2117 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 TMSB4XP2-201ENST00000335179 210 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 Y_RNA.72-201ENST00000362894 103 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 SNORA4.1-201ENST00000364263 144 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 RNU6-505P-201ENST00000384427 107 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 MIR568-201ENST00000385036 95 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 SNORA40.3-201ENST00000390964 122 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AP003170.5-201ENST00000397185 335 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 CYCSP45-201ENST00000402289 315 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 BX284632.2-201ENST00000421091 399 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AL365184.2-201ENST00000431139 435 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AL512605.1-202ENST00000441919 381 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AL359955.2-201ENST00000445380 353 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AL121877.1-201ENST00000453704 622 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 RPL38P1-201ENST00000460914 211 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC105918.1-201ENST00000474399 838 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC093278.1-201ENST00000494700 600 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 RNA5SP271-201ENST00000516700 88 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC093249.1-201ENST00000567049 203 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC100830.2-201ENST00000581636 240 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 Z95327.3-201ENST00000610385 572 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 MIR1302-1-201ENST00000637932 143 ntBASIC7.09□□□□□ -1.27
NEDD1Q8NHV4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms