Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC092642.1-201ENST00000392417 425 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 RN7SKP285-201ENST00000410137 318 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC069157.1-201ENST00000421749 137 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 ELOCP14-201ENST00000428070 331 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AL136231.1-201ENST00000429407 730 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 ELOCP7-201ENST00000439968 331 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC007383.1-201ENST00000445875 636 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 RPL18AP17-201ENST00000455326 198 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC074386.1-201ENST00000476560 767 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 RPL23AP40-201ENST00000487630 390 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC098799.3-201ENST00000506095 438 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 HMGB1P28-201ENST00000507778 552 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 MTCO1P35-201ENST00000515270 228 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC125612.1-201ENST00000547580 377 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 BNIP3P8-201ENST00000597863 560 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 RNU6-88P-201ENST00000606801 100 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC064836.2-201ENST00000609491 462 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 U1.25-201ENST00000614085 162 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 U1.34-201ENST00000618578 162 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC241377.1-201ENST00000619797 406 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 U1.31-201ENST00000620022 160 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AL139089.1-201ENST00000620372 975 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC016583.1-201ENST00000624221 2431 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC015689.2-201ENST00000528172 1738 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 OR5BR1P-201ENST00000524992 1330 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NUP43Q8NFH3 AC022164.1-201ENST00000568767 2673 ntBASIC5.7□□□□□ -1.5
NUP43Q8NFH3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 AC020656.2-201ENST00000613291 5309 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 AC022325.1-201ENST00000502748 2199 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 RNU6-582P-201ENST00000362989 107 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 RNU6-1090P-201ENST00000364065 94 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 RNU105B-201ENST00000364478 208 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 Y_RNA.296-201ENST00000364930 108 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 Y_RNA.509-201ENST00000384506 99 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 AC025750.1-201ENST00000399891 379 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 RNA5SP198-201ENST00000410376 127 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 NUP35P2-201ENST00000416748 943 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 RPS15AP30-201ENST00000420976 390 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 AC099782.1-201ENST00000425889 474 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 MTCYBP45-201ENST00000435243 565 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 AL162739.1-201ENST00000450606 307 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 VDAC2P4-201ENST00000452925 711 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 snoU109.1-201ENST00000459339 135 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP43Q8NFH3 AP002453.1-201ENST00000492327 668 ntBASIC5.69□□□□□ -1.5
NUP43Q8NFH3 ARL4AP2-201ENST00000507378 601 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms