Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC008033.1-201ENST00000216407 1162 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 OR5P1P-201ENST00000299512 925 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC104297.1-201ENST00000393779 870 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 MIR1911-201ENST00000410783 80 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 VN1R31P-201ENST00000417498 730 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 RWDD4P2-201ENST00000426392 563 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 RPS29P22-201ENST00000472363 168 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 RWDD4P1-201ENST00000488019 565 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC015795.1-201ENST00000513669 327 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC005034.4-201ENST00000603612 899 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC073342.3-201ENST00000624211 193 ntBASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC65Q8IXS2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC067945.1-201ENST00000342609 618 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 RN7SKP216-201ENST00000411050 312 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 EIF4EP1-201ENST00000422311 642 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 SKP1P3-201ENST00000429280 487 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 RPL12P28-201ENST00000430852 489 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC011998.1-201ENST00000433403 117 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 FTH1P16-201ENST00000435241 552 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 RPL7P33-201ENST00000444159 742 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 CCNHP1-201ENST00000513311 678 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 SNORD116-30-201ENST00000516468 85 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC090281.1-201ENST00000523019 276 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 OR5BC1P-201ENST00000529327 739 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 DEFB109D-201ENST00000529497 240 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AL352979.3-201ENST00000553515 247 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC008536.1-201ENST00000602872 669 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC019193.2-201ENST00000610012 634 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC026368.1-201ENST00000614934 690 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC023509.5-201ENST00000617434 807 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 FP325313.1-201ENST00000638228 703 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 Z98755.1-201ENST00000407015 1384 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AL137100.1-201ENST00000556703 1620 ntBASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC65Q8IXS2 AC025031.4-201ENST00000621248 3271 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 AL133412.1-201ENST00000380194 2992 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 PNPT1P2-201ENST00000456768 2050 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 AC073429.2-201ENST00000569694 1444 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 RNU1-15P-201ENST00000353977 144 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 RPL23AP59-201ENST00000399415 461 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 RPL5P19-201ENST00000404228 893 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 VN1R8P-201ENST00000407739 893 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 AL139095.3-201ENST00000419672 1203 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 TXNP2-201ENST00000443918 295 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 SBDSP1-204ENST00000453858 737 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 RPL35AP15-201ENST00000468042 339 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 PHBP17-201ENST00000528576 541 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 AC090515.3-201ENST00000560431 315 ntBASIC4.84□□□□□ -1.63
CCDC65Q8IXS2 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms