Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HERC6Q8IVU3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HERC6Q8IVU3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.41□□□□□ -1.54
HERC6Q8IVU3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.41□□□□□ -1.54
HERC6Q8IVU3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.41□□□□□ -1.54
HERC6Q8IVU3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.41□□□□□ -1.54
HERC6Q8IVU3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 RNU6-304P-201ENST00000364855 107 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 OR52E6-202ENST00000379946 954 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 RNU6-317P-201ENST00000384031 107 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 RN7SKP106-201ENST00000410832 272 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC008280.2-201ENST00000455473 307 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 snoU109.3-201ENST00000459477 145 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 RPL7AP10-201ENST00000481016 791 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 RPS12P31-201ENST00000491419 398 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 SUMO2P5-201ENST00000506790 245 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC069306.1-201ENST00000507006 843 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 RN7SKP21-201ENST00000516503 220 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC098935.2-201ENST00000604222 466 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC099785.1-201ENST00000605697 437 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 MIR6853-201ENST00000619642 74 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 AC099654.8-201ENST00000637757 681 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.4□□□□□ -1.54
HERC6Q8IVU3 OR52H1-202ENST00000641796 1061 ntBASIC5.4□□□□□ -1.54
HERC6Q8IVU3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HERC6Q8IVU3 AC091046.3-201ENST00000631455 1574 ntBASIC5.4□□□□□ -1.55
HERC6Q8IVU3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HERC6Q8IVU3 AC139713.2-214ENST00000642059 1811 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 MIR122-201ENST00000385044 85 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC234779.1-201ENST00000425910 285 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC004975.1-201ENST00000428733 208 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 RPL7AP49-201ENST00000429522 581 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AL591438.1-201ENST00000433508 581 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AL645638.1-201ENST00000440519 361 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 EIF2S2P2-201ENST00000447161 982 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC010733.1-201ENST00000451515 401 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC243772.1-201ENST00000451620 410 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 TPT1P1-201ENST00000458495 518 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 OR52A4P-201ENST00000472867 958 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC021193.1-201ENST00000511607 420 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 MTND1P6-201ENST00000523621 946 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 LSM3P2-201ENST00000551246 273 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 BNIP3P5-201ENST00000562290 498 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 MIR4789-201ENST00000577469 82 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC090330.1-201ENST00000588646 764 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC092653.1-201ENST00000608509 531 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 MLECP1-201ENST00000615893 709 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 U6.48-201ENST00000618523 106 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 FRG1EP-201ENST00000634469 770 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC093849.1-201ENST00000563631 2209 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 BX005019.1-201ENST00000561881 1810 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 MFSD8-220ENST00000641243 1422 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HERC6Q8IVU3 AC100871.1-201ENST00000507871 1456 ntBASIC5.39□□□□□ -1.55
HERC6Q8IVU3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 AC009313.2-201ENST00000417893 1941 ntBASIC5.38□□□□□ -1.55
HERC6Q8IVU3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HERC6Q8IVU3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms