Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL671855.1-201ENST00000446875 1203 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 ZNF114P1-201ENST00000453500 292 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 RNU6-956P-201ENST00000458868 103 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AL024509.2-201ENST00000493462 493 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC116353.2-201ENST00000505332 712 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 MTATP6P22-201ENST00000507369 598 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC091965.2-201ENST00000512324 613 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC126177.5-201ENST00000549599 178 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 EEF1B2P4-201ENST00000551398 348 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 ELOCP28-201ENST00000590044 317 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AL109618.2-201ENST00000605527 211 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC016769.4-201ENST00000616893 535 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC139769.3-201ENST00000618383 175 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AC022140.2-201ENST00000623500 188 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AL078621.3-201ENST00000623707 2042 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.27□□□□□ -1.57
VRK3Q8IV63 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VRK3Q8IV63 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 AL078595.2-201ENST00000605309 1780 ntBASIC5.27□□□□□ -1.57
VRK3Q8IV63 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 OR56B2P-201ENST00000317102 954 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 RN7SKP160-201ENST00000363804 340 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 Y_RNA.192-201ENST00000363977 102 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC009804.1-201ENST00000400949 179 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 RNU6-757P-201ENST00000410334 100 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 RN7SKP59-201ENST00000410520 314 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 CDK8P2-201ENST00000415020 547 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 NPM1P18-201ENST00000434232 732 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 CDC27P1-201ENST00000445384 715 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 RPL5P32-201ENST00000454085 879 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC011979.1-201ENST00000472300 483 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 SIAH1P1-201ENST00000479411 923 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 EIF3LP3-201ENST00000495197 822 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC108693.1-201ENST00000496068 432 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 RPSAP51-201ENST00000497462 645 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC004069.2-201ENST00000505438 1114 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 UBE2NP1-201ENST00000545592 458 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC011260.1-201ENST00000578420 472 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 RN7SL356P-201ENST00000582228 248 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms