Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
RNF135Q8IUD6 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AC007993.1-201ENST00000621298 2430 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 Y_RNA.138-201ENST00000363462 102 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 RNA5SP172-201ENST00000365061 118 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 LCN1P2-201ENST00000372030 223 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 RNU2-8P-201ENST00000410727 190 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 BRWD1P3-201ENST00000428816 390 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 MTND3P2-201ENST00000438452 342 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 RPS23P9-201ENST00000448848 438 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 RN7SL39P-201ENST00000462264 297 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 RPL17P2-201ENST00000491913 451 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AC093278.1-201ENST00000494700 600 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AL158196.1-201ENST00000616786 434 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AC090527.3-201ENST00000619041 548 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 AC024940.5-201ENST00000622889 474 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
RNF135Q8IUD6 NMD3P1-201ENST00000439704 1488 ntBASIC7.11□□□□□ -1.27
RNF135Q8IUD6 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 Y_RNA.157-201ENST00000363638 102 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 IARS-201ENST00000375627 697 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 RNU1-39P-201ENST00000383897 165 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 MIR188-201ENST00000385034 86 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 HMGB1P17-201ENST00000403495 628 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 RPL12P9-201ENST00000412942 488 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AC004987.3-201ENST00000413879 771 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 OR51AB1P-201ENST00000429046 620 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 SAR1AP4-201ENST00000429225 591 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 RPS10P21-201ENST00000430654 475 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 CEACAMP5-201ENST00000448037 961 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 RPL31P15-201ENST00000449770 338 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 HIGD1AP8-201ENST00000453927 274 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 RN7SL216P-201ENST00000471607 298 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 RPL5P12-201ENST00000477071 851 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 RN7SL705P-201ENST00000481678 294 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 MTND4LP22-201ENST00000508209 276 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AC108471.1-201ENST00000513977 287 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AC105029.1-201ENST00000520250 669 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 PHBP17-201ENST00000528576 541 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 NACA-211ENST00000548563 827 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 AL096712.1-201ENST00000614561 159 ntBASIC7.1□□□□□ -1.27
RNF135Q8IUD6 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
RNF135Q8IUD6 CKAP2P1-201ENST00000555477 2049 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms