Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 BCLAF1P2-201ENST00000624956 2609 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 AL591135.1-201ENST00000401578 5914 ntBASIC2.85□□□□□ -1.95
CSMD3Q7Z407 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC2.85□□□□□ -1.95
CSMD3Q7Z407 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AC021242.1-201ENST00000507315 2035 ntBASIC2.84□□□□□ -1.95
CSMD3Q7Z407 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 MARK2P15-201ENST00000432204 2186 ntBASIC2.84□□□□□ -1.95
CSMD3Q7Z407 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 U3.26-201ENST00000391236 204 ntBASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AC245052.5-201ENST00000416320 649 ntBASIC2.84□□□□□ -1.95
CSMD3Q7Z407 RPL5P2-201ENST00000429598 854 ntBASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AC092691.2-201ENST00000461787 803 ntBASIC2.84□□□□□ -1.95
CSMD3Q7Z407 RPS26P28-201ENST00000470806 348 ntBASIC2.84□□□□□ -1.95
CSMD3Q7Z407 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 MIR4660-201ENST00000583549 74 ntBASIC2.84□□□□□ -1.95
CSMD3Q7Z407 AC244505.7-201ENST00000599675 272 ntBASIC2.84□□□□□ -1.95
CSMD3Q7Z407 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC2.84□□□□□ -1.95
CSMD3Q7Z407 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 EIF1P3-201ENST00000423841 334 ntBASIC2.84□□□□□ -1.96
CSMD3Q7Z407 AC083863.1-201ENST00000438811 231 ntBASIC2.84□□□□□ -1.96
CSMD3Q7Z407 RPS29P19-201ENST00000479709 171 ntBASIC2.84□□□□□ -1.96
CSMD3Q7Z407 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 AC124068.1-201ENST00000563131 678 ntBASIC2.84□□□□□ -1.96
CSMD3Q7Z407 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.96
CSMD3Q7Z407 PRO1804-201ENST00000623780 2050 ntBASIC2.84□□□□□ -1.96
CSMD3Q7Z407 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.83□□□□□ -1.96
CSMD3Q7Z407 RPL5P24-201ENST00000463742 885 ntBASIC2.83□□□□□ -1.96
CSMD3Q7Z407 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 MIR921-201ENST00000401133 56 ntBASIC2.83□□□□□ -1.96
CSMD3Q7Z407 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 RPL7P22-201ENST00000466005 733 ntBASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 YPEL5P2-201ENST00000605553 359 ntBASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 PRDX3P3-201ENST00000447765 522 ntBASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AC037198.2-201ENST00000478845 733 ntBASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 AL021877.2-201ENST00000624442 10684 ntBASIC2.83□□□□□ -1.96
CSMD3Q7Z407 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD3Q7Z407 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD3Q7Z407 CYCSP53-201ENST00000455540 265 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms