Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 AC005154.2-201ENST00000438110 379 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 CASP3P1-201ENST00000446037 609 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 RN7SKP276-201ENST00000516242 268 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 RNA5SP309-201ENST00000516670 106 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 AC021006.3-201ENST00000530771 192 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 OR4C2P-201ENST00000530855 1064 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 AC005034.4-201ENST00000603612 899 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 AL391261.4-201ENST00000616012 481 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 RN7SL722P-201ENST00000617780 284 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 RN7SL565P-201ENST00000618246 284 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC022893.2-201ENST00000564832 3296 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC021146.4-201ENST00000309229 279 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 RNA5SP123-201ENST00000363244 119 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 RNU6-171P-201ENST00000384354 107 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 RPL6P29-201ENST00000414863 865 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 ARAFP1-201ENST00000422172 605 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AL132765.1-201ENST00000434165 553 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 USP9YP7-201ENST00000436723 430 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 YWHAZP2-201ENST00000440317 728 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 RPL23AP43-201ENST00000446445 471 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 USP9YP32-201ENST00000452432 430 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 SEPT7P6-201ENST00000469999 1143 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 RN7SL585P-201ENST00000470538 280 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 RN7SL101P-201ENST00000496350 279 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 LDHBP3-201ENST00000514909 822 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 IGKV3D-34-201ENST00000522638 302 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC084757.1-201ENST00000559987 490 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AL133338.2-201ENST00000604292 736 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 MIR6768-201ENST00000610734 72 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 LINC01808-202ENST00000641680 1116 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
CCDC58Q4VC31 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC58Q4VC31 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 FAM3C2-201ENST00000312214 681 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 RNA5SP388-201ENST00000362584 119 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC58Q4VC31 RAB5CP1-201ENST00000395972 580 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 RPS12P10-201ENST00000427031 377 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AL365396.1-201ENST00000430854 671 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 CEACAMP1-201ENST00000434624 1035 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 PTMAP6-201ENST00000439110 327 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AC114495.1-201ENST00000441274 436 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 EEF1B2P5-201ENST00000444820 548 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 AL035551.1-201ENST00000446931 348 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 CLIC4P1-201ENST00000453177 535 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 RNU7-170P-201ENST00000459303 61 ntBASIC3.88□□□□□ -1.79
CCDC58Q4VC31 PPIAP21-201ENST00000464473 501 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms