Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RPS3AP6-201ENST00000484430 795 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.51□□□□□ -2.01
HSPG2P98160 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC2.51□□□□□ -2.01
HSPG2P98160 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.51□□□□□ -2.01
HSPG2P98160 AC006077.1-201ENST00000604746 343 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 AL592291.1-201ENST00000403830 352 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 TEX41-206ENST00000432608 661 ntTSL 3 BASIC2.51□□□□□ -2.01
HSPG2P98160 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.51□□□□□ -2.01
HSPG2P98160 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 RN7SL812P-201ENST00000493791 279 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 RNA5SP497-201ENST00000516081 97 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.51□□□□□ -2.01
HSPG2P98160 AC013412.1-201ENST00000610687 192 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 DNM1P47-203ENST00000571780 12667 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC2.51□□□□□ -2.01
HSPG2P98160 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 RPL7P44-201ENST00000424827 742 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.51□□□□□ -2.01
HSPG2P98160 AC018635.1-201ENST00000468292 1030 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 RPL7P23-201ENST00000493874 747 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 AC020914.6-201ENST00000594327 272 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 AC015726.1-201ENST00000602353 681 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC2.51□□□□□ -2.01
HSPG2P98160 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 AL672167.1-204ENST00000641875 3017 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 SNORA3.3-201ENST00000408712 125 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 RNA5SP120-201ENST00000410900 112 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 HSFY4P-201ENST00000415994 1181 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 AC092641.1-201ENST00000440229 772 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC2.5□□□□□ -2.01
HSPG2P98160 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.5□□□□□ -2.01
HSPG2P98160 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HSPG2P98160 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HSPG2P98160 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
HSPG2P98160 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.5□□□□□ -2.01
HSPG2P98160 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC2.5□□□□□ -2.01
HSPG2P98160 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 AC006504.3-201ENST00000586818 523 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC2.5□□□□□ -2.01
HSPG2P98160 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 MIR8058-201ENST00000615737 89 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 AC110801.1-201ENST00000623590 212 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.5□□□□□ -2.01
HSPG2P98160 AL445433.1-201ENST00000457507 257 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 AL133162.1-201ENST00000463228 453 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
HSPG2P98160 MIR5187-201ENST00000583479 76 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 AC138932.5-201ENST00000617759 563 ntBASIC2.5□□□□□ -2.01
HSPG2P98160 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC2.5□□□□□ -2.01
HSPG2P98160 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HSPG2P98160 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
HSPG2P98160 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
HSPG2P98160 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 NXPH1-205ENST00000602349 1953 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 FCF1P5-201ENST00000406490 482 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 AC025750.2-201ENST00000442609 450 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 RPL21P23-201ENST00000446654 460 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 AC012158.1-204ENST00000483430 465 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms