Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC3.28□□□□□ -1.88
CCL20P78556 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.28□□□□□ -1.88
CCL20P78556 AC005726.4-201ENST00000582858 458 ntBASIC3.28□□□□□ -1.88
CCL20P78556 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.28□□□□□ -1.88
CCL20P78556 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.28□□□□□ -1.88
CCL20P78556 AL133338.2-201ENST00000604292 736 ntBASIC3.28□□□□□ -1.88
CCL20P78556 AC017076.1-201ENST00000607613 578 ntBASIC3.28□□□□□ -1.88
CCL20P78556 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.28□□□□□ -1.88
CCL20P78556 AC116447.1-201ENST00000613153 453 ntBASIC3.28□□□□□ -1.88
CCL20P78556 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CCL20P78556 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.28□□□□□ -1.88
CCL20P78556 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.28□□□□□ -1.88
CCL20P78556 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCL20P78556 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCL20P78556 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCL20P78556 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
CCL20P78556 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CCL20P78556 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 CYP1D1P-201ENST00000416662 1433 ntBASIC3.27□□□□□ -1.89
CCL20P78556 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 AC025031.4-201ENST00000621248 3271 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC093311.1-201ENST00000506586 2021 ntBASIC3.27□□□□□ -1.89
CCL20P78556 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 MFSD8-216ENST00000641147 4009 ntBASIC3.27□□□□□ -1.89
CCL20P78556 RPL23P2-201ENST00000320371 421 ntBASIC3.27□□□□□ -1.89
CCL20P78556 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.27□□□□□ -1.89
CCL20P78556 PGBD4P8-201ENST00000412993 562 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC019050.1-201ENST00000418508 492 ntBASIC3.27□□□□□ -1.89
CCL20P78556 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL20P78556 OR6K4P-201ENST00000423179 955 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC093084.1-201ENST00000424233 687 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC096638.2-201ENST00000434965 711 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.27□□□□□ -1.89
CCL20P78556 AC023141.9-201ENST00000458734 412 ntBASIC3.27□□□□□ -1.89
CCL20P78556 RN7SL172P-201ENST00000460535 303 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC018638.3-201ENST00000461273 132 ntBASIC3.27□□□□□ -1.89
CCL20P78556 RN7SL168P-201ENST00000463821 279 ntBASIC3.27□□□□□ -1.89
CCL20P78556 RN7SL717P-201ENST00000478343 297 ntBASIC3.27□□□□□ -1.89
CCL20P78556 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL20P78556 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 AC026726.1-201ENST00000512859 601 ntBASIC3.27□□□□□ -1.89
CCL20P78556 RN7SKP147-201ENST00000517154 244 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.27□□□□□ -1.89
CCL20P78556 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL20P78556 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL20P78556 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.27□□□□□ -1.89
CCL20P78556 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.27□□□□□ -1.89
CCL20P78556 AC099489.2-201ENST00000574976 260 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC020978.7-201ENST00000575953 1187 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL20P78556 AC079587.1-201ENST00000603846 277 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC104662.1-201ENST00000604448 511 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AL354984.3-201ENST00000604803 325 ntBASIC3.27□□□□□ -1.89
CCL20P78556 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.27□□□□□ -1.89
CCL20P78556 MIR6889-201ENST00000613185 59 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC004477.3-201ENST00000614061 590 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AP006248.2-201ENST00000623309 592 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AP002799.1-201ENST00000623552 423 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.27□□□□□ -1.89
CCL20P78556 AC008013.2-202ENST00000637965 364 ntBASIC3.27□□□□□ -1.89
CCL20P78556 OR8A1-204ENST00000642111 1145 ntBASIC3.27□□□□□ -1.89
CCL20P78556 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 AC008725.1-201ENST00000605123 2263 ntBASIC3.27□□□□□ -1.89
CCL20P78556 AC114546.3-201ENST00000623582 1734 ntBASIC3.27□□□□□ -1.89
CCL20P78556 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCL20P78556 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
CCL20P78556 TNPO1P3-201ENST00000436471 2662 ntBASIC3.26□□□□□ -1.89
CCL20P78556 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CCL20P78556 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CCL20P78556 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.26□□□□□ -1.89
CCL20P78556 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 AC233968.1-201ENST00000611212 1300 ntBASIC3.26□□□□□ -1.89
CCL20P78556 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CCL20P78556 AC092079.1-201ENST00000558620 1985 ntBASIC3.26□□□□□ -1.89
CCL20P78556 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCL20P78556 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCL20P78556 RNU6-697P-201ENST00000363348 107 ntBASIC3.26□□□□□ -1.89
CCL20P78556 RNA5SP175-201ENST00000364275 119 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCL20P78556 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL20P78556 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.26□□□□□ -1.89
CCL20P78556 RNU6-146P-201ENST00000384602 108 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AL031985.1-201ENST00000392713 418 ntBASIC3.26□□□□□ -1.89
CCL20P78556 ATP5F1P4-201ENST00000397288 746 ntBASIC3.26□□□□□ -1.89
CCL20P78556 HSPD1P16-201ENST00000402302 394 ntBASIC3.26□□□□□ -1.89
CCL20P78556 MIR1286-201ENST00000408112 78 ntBASIC3.26□□□□□ -1.89
CCL20P78556 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.26□□□□□ -1.89
CCL20P78556 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.26□□□□□ -1.89
CCL20P78556 RPL30P2-201ENST00000414021 291 ntBASIC3.26□□□□□ -1.89
CCL20P78556 NPM1P4-201ENST00000414095 812 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AL513325.1-201ENST00000417716 1034 ntBASIC3.26□□□□□ -1.89
CCL20P78556 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms