Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SNORD116-26-201ENST00000516006 96 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 IGKV1-32-201ENST00000519290 311 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.9□□□□□ -1.46
RHBDL3P58872 OR5AN2P-201ENST00000534535 896 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 AP001880.2-201ENST00000538233 448 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 SETP1-201ENST00000556014 845 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RHBDL3P58872 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.9□□□□□ -1.46
RHBDL3P58872 NDUFB4P11-201ENST00000560510 395 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RHBDL3P58872 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.9□□□□□ -1.46
RHBDL3P58872 RN7SL52P-201ENST00000584271 284 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 VN1R87P-201ENST00000596706 487 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RHBDL3P58872 AL512782.1-201ENST00000603093 364 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 RN7SL722P-201ENST00000617780 284 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 RN7SL565P-201ENST00000618246 284 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.9□□□□□ -1.46
RHBDL3P58872 AC138965.3-201ENST00000623875 498 ntBASIC5.9□□□□□ -1.46
RHBDL3P58872 ASNSP1-204ENST00000641977 1664 ntBASIC5.9□□□□□ -1.47
RHBDL3P58872 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RHBDL3P58872 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RHBDL3P58872 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.9□□□□□ -1.47
RHBDL3P58872 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDL3P58872 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDL3P58872 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDL3P58872 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDL3P58872 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDL3P58872 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDL3P58872 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDL3P58872 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDL3P58872 AL357515.1-201ENST00000402967 542 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AC114814.2-201ENST00000419195 485 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.89□□□□□ -1.47
RHBDL3P58872 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AL359265.2-201ENST00000434367 631 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 RPS26P40-201ENST00000435209 294 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 ELOCP11-201ENST00000436690 332 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 ELOCP16-201ENST00000444494 332 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AC004980.3-201ENST00000447046 365 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AC000111.2-201ENST00000448200 210 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AC010733.1-201ENST00000451515 401 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 RPL7P32-201ENST00000457119 744 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RHBDL3P58872 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDL3P58872 AC006463.2-201ENST00000473326 348 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 MTATP6P9-201ENST00000515039 680 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDL3P58872 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.89□□□□□ -1.47
RHBDL3P58872 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDL3P58872 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
RHBDL3P58872 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.89□□□□□ -1.47
RHBDL3P58872 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.89□□□□□ -1.47
RHBDL3P58872 AC209154.1-201ENST00000582156 337 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AC011477.5-201ENST00000586571 259 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.89□□□□□ -1.47
RHBDL3P58872 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDL3P58872 AC068790.4-201ENST00000602474 263 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AL391262.2-201ENST00000622466 494 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 CR381572.2-201ENST00000624852 397 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 AL590396.4-201ENST00000636779 956 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.89□□□□□ -1.47
RHBDL3P58872 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
RHBDL3P58872 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RHBDL3P58872 AC104260.2-201ENST00000623551 3497 ntBASIC5.89□□□□□ -1.47
RHBDL3P58872 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
RHBDL3P58872 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDL3P58872 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDL3P58872 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RHBDL3P58872 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RHBDL3P58872 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDL3P58872 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.88□□□□□ -1.47
RHBDL3P58872 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RHBDL3P58872 AL512646.1-201ENST00000269395 1077 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RHBDL3P58872 MIR141-201ENST00000384975 95 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.88□□□□□ -1.47
RHBDL3P58872 RSU1P3-201ENST00000412878 835 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 OR2B7P-201ENST00000429302 934 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 UBE2V1P5-201ENST00000440070 405 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AL929288.2-201ENST00000446368 407 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 SLC25A18P1-201ENST00000449385 454 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.88□□□□□ -1.47
RHBDL3P58872 RN7SL346P-201ENST00000491561 294 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AC093801.2-201ENST00000503966 1050 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 AC022790.1-201ENST00000522872 204 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.88□□□□□ -1.47
RHBDL3P58872 PDCD5P1-201ENST00000543528 309 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AL442163.2-201ENST00000553912 710 ntBASIC5.88□□□□□ -1.47
RHBDL3P58872 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.88□□□□□ -1.47
RHBDL3P58872 AC093765.1-201ENST00000603758 881 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms