Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 AC015804.1-201ENST00000622935 435 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.13□□□□□ -1.59
CLRN1P58418 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLRN1P58418 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLRN1P58418 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.13□□□□□ -1.59
CLRN1P58418 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.13□□□□□ -1.59
CLRN1P58418 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.13□□□□□ -1.59
CLRN1P58418 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLRN1P58418 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLRN1P58418 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 RNA5SP273-201ENST00000362484 113 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 RNA5SP477-201ENST00000362639 119 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 RNU6-492P-201ENST00000363035 104 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 BOLA3P4-201ENST00000418151 400 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 AC073069.1-201ENST00000428657 441 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 RPS24P8-201ENST00000431490 402 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 OR2B8P-201ENST00000432841 938 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 CBX1P4-201ENST00000439415 457 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 COX6CP12-201ENST00000446748 202 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 EPS15P1-201ENST00000448836 336 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.12□□□□□ -1.59
CLRN1P58418 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 ARPC3P2-201ENST00000457786 533 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 TPT1P7-201ENST00000458300 517 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AC091544.1-201ENST00000484702 348 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 CR383656.1-201ENST00000484916 377 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 RPS4XP15-201ENST00000489210 795 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.12□□□□□ -1.59
CLRN1P58418 AC074255.1-201ENST00000511259 501 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 IGKV2-36-201ENST00000519999 223 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.12□□□□□ -1.59
CLRN1P58418 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.12□□□□□ -1.59
CLRN1P58418 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.12□□□□□ -1.59
CLRN1P58418 AC126615.2-201ENST00000553003 515 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.12□□□□□ -1.59
CLRN1P58418 TRAV15-201ENST00000556680 249 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.12□□□□□ -1.59
CLRN1P58418 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.12□□□□□ -1.59
CLRN1P58418 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 MIR4271-201ENST00000582451 67 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.12□□□□□ -1.59
CLRN1P58418 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.12□□□□□ -1.59
CLRN1P58418 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.12□□□□□ -1.59
CLRN1P58418 AC090186.1-201ENST00000605991 572 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AC093388.1-201ENST00000609166 430 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AC090607.5-201ENST00000615692 224 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 AC024884.1-201ENST00000620583 399 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 AC012414.7-202ENST00000622705 1090 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.12□□□□□ -1.59
CLRN1P58418 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.12□□□□□ -1.59
CLRN1P58418 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CLRN1P58418 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 RLIMP2-201ENST00000427891 1563 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLRN1P58418 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
CLRN1P58418 AL031595.2-201ENST00000624215 19071 ntBASIC5.12□□□□□ -1.59
CLRN1P58418 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CLRN1P58418 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.11□□□□□ -1.59
CLRN1P58418 AC004076.2-201ENST00000620532 3323 ntBASIC5.11□□□□□ -1.59
CLRN1P58418 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLRN1P58418 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms