Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH13P55290 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH13P55290 AC140172.1-201ENST00000502928 141 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH13P55290 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH13P55290 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH13P55290 RN7SKP66-201ENST00000516681 231 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH13P55290 AC022832.1-201ENST00000530718 645 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AC006518.1-201ENST00000541449 943 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AC090022.1-201ENST00000546569 311 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH13P55290 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH13P55290 AC068620.3-201ENST00000602749 560 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AC144521.1-201ENST00000607148 956 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AC006946.3-201ENST00000609791 756 ntBASIC4.67□□□□□ -1.66
CDH13P55290 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH13P55290 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH13P55290 MIR6729-201ENST00000618194 65 ntBASIC4.67□□□□□ -1.66
CDH13P55290 U6.107-201ENST00000637108 79 ntBASIC4.67□□□□□ -1.66
CDH13P55290 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH13P55290 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH13P55290 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH13P55290 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDH13P55290 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH13P55290 HSPA8P19-201ENST00000505359 1517 ntBASIC4.67□□□□□ -1.66
CDH13P55290 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH13P55290 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CDH13P55290 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CDH13P55290 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CDH13P55290 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH13P55290 ENSAP3-201ENST00000312710 333 ntBASIC4.66□□□□□ -1.66
CDH13P55290 U8.4-201ENST00000363626 134 ntBASIC4.66□□□□□ -1.66
CDH13P55290 RNU6-207P-201ENST00000384137 107 ntBASIC4.66□□□□□ -1.66
CDH13P55290 MIR92A2-201ENST00000385299 75 ntBASIC4.66□□□□□ -1.66
CDH13P55290 VDAC2P1-201ENST00000399358 958 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AL355143.1-201ENST00000407101 841 ntBASIC4.66□□□□□ -1.66
CDH13P55290 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH13P55290 VN1R37P-201ENST00000419096 748 ntBASIC4.66□□□□□ -1.66
CDH13P55290 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH13P55290 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH13P55290 FABP7P1-201ENST00000424004 391 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AC093414.1-201ENST00000434712 514 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH13P55290 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH13P55290 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH13P55290 AL096803.2-201ENST00000450032 677 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH13P55290 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH13P55290 RN7SL515P-201ENST00000463999 297 ntBASIC4.66□□□□□ -1.66
CDH13P55290 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CDH13P55290 TCP11X3P-202ENST00000514289 1254 ntBASIC4.66□□□□□ -1.66
CDH13P55290 RNA5SP228-201ENST00000516232 133 ntBASIC4.66□□□□□ -1.66
CDH13P55290 RN7SKP147-201ENST00000517154 244 ntBASIC4.66□□□□□ -1.66
CDH13P55290 HMGB1P19-201ENST00000517578 577 ntBASIC4.66□□□□□ -1.66
CDH13P55290 MORF4L1P3-201ENST00000525966 950 ntBASIC4.66□□□□□ -1.66
CDH13P55290 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH13P55290 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH13P55290 ATP5F1P7-201ENST00000567330 760 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH13P55290 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH13P55290 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH13P55290 AC096553.1-201ENST00000605169 829 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AC096586.1-201ENST00000610267 561 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AC007497.1-201ENST00000610421 561 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AC007275.1-201ENST00000621243 671 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AC138907.10-201ENST00000623708 983 ntBASIC4.66□□□□□ -1.66
CDH13P55290 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH13P55290 AL596275.2-204ENST00000641628 552 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AL596275.2-206ENST00000641957 626 ntBASIC4.66□□□□□ -1.66
CDH13P55290 AL118496.1-201ENST00000440201 1812 ntBASIC4.66□□□□□ -1.66
CDH13P55290 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CDH13P55290 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CDH13P55290 Z95327.2-201ENST00000414579 1873 ntBASIC4.66□□□□□ -1.66
CDH13P55290 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH13P55290 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH13P55290 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH13P55290 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH13P55290 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CDH13P55290 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH13P55290 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH13P55290 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CDH13P55290 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH13P55290 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH13P55290 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CDH13P55290 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH13P55290 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH13P55290 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH13P55290 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CDH13P55290 RNU6-178P-201ENST00000384631 104 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms